Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AK4P4-201ENST00000419465 646 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 BX119904.1-201ENST00000432026 348 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AL606490.7-201ENST00000433136 191 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 HMGB3P24-201ENST00000433260 622 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 NMNAT1P2-201ENST00000435192 860 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC245517.2-201ENST00000442890 346 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 snoU13.29-201ENST00000459370 104 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 NENFP3-201ENST00000503735 313 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 SNORA70.20-201ENST00000516848 126 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 HSPE1P2-201ENST00000554777 306 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 NDUFA5P11-201ENST00000567995 343 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 MTND4LP24-201ENST00000572277 291 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AP000811.1-201ENST00000603803 651 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AL049840.6-201ENST00000604583 345 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 DPRXP5-201ENST00000604662 539 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC124312.4-201ENST00000605533 310 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AL354976.1-201ENST00000613843 387 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC022079.2-201ENST00000619739 566 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AL035661.1-201ENST00000620459 1144 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC005832.2-201ENST00000538921 1430 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.62□□□□□ -1.51
VRK3Q8IV63 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 ECM1P2-201ENST00000503354 1577 ntBASIC5.62□□□□□ -1.51
VRK3Q8IV63 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK3Q8IV63 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 SNORA64.1-201ENST00000362600 132 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 TAF9BP2-201ENST00000400856 499 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL445183.3-201ENST00000414168 502 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 MTCO3P41-201ENST00000414801 328 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC096644.3-201ENST00000416788 338 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 VN1R31P-201ENST00000417498 730 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 ELOCP9-201ENST00000418624 239 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK3Q8IV63 MTND1P4-201ENST00000435196 415 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC242426.1-201ENST00000435270 960 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 MTCO2P16-201ENST00000436962 677 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC073109.1-201ENST00000445066 978 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 VN1R32P-201ENST00000452234 905 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 RPS6P2-201ENST00000454208 705 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 RPL7P45-201ENST00000455851 743 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC084754.1-201ENST00000463466 464 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 MRE11P1-201ENST00000464884 2127 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 MTND3P7-201ENST00000474435 343 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC108734.3-201ENST00000481241 1165 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 RPS12P31-201ENST00000491419 398 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 HMGB1P3-201ENST00000502802 616 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC091951.3-201ENST00000504093 246 ntBASIC5.61□□□□□ -1.51
VRK3Q8IV63 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK3Q8IV63 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms