Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RPL12P34-201ENST00000424532 479 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 NDUFB4P8-201ENST00000435351 367 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC012075.1-201ENST00000436549 580 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 MED28P3-201ENST00000444288 531 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC100832.1-201ENST00000471945 383 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 RWDD4P1-201ENST00000488019 565 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC091912.1-201ENST00000511351 248 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC008083.2-201ENST00000546707 476 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AL391834.1-201ENST00000609609 560 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 CR589904.2-201ENST00000612533 440 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC011472.4-201ENST00000615848 491 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 AC131238.1-201ENST00000617135 328 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 MIR8080-201ENST00000622224 89 ntBASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NUP54Q7Z3B4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 CASC19-221ENST00000641309 1382 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 MIR133A2-201ENST00000347538 102 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 Y_RNA.110-201ENST00000363220 99 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 SNORA40.4-201ENST00000390971 128 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 CHMP1B2P-201ENST00000399581 597 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 GSTM3P2-201ENST00000412746 530 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AL358176.3-201ENST00000420757 454 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AC009784.1-201ENST00000426484 460 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 RPL17P35-201ENST00000432217 549 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 ZNF965P-201ENST00000432501 817 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 MTND2P21-201ENST00000436242 1042 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AC074367.1-201ENST00000438685 1125 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AL359265.1-201ENST00000440296 795 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AC073465.2-201ENST00000440938 498 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 XKRY2-201ENST00000442362 1093 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AC105399.1-202ENST00000447303 205 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 MTND6P6-201ENST00000478031 263 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 MTND3P24-201ENST00000506306 329 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 RPL7L1P4-201ENST00000513004 707 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 SCARNA16.4-201ENST00000516956 187 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AC079064.1-201ENST00000528365 362 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AC134349.2-201ENST00000535136 910 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 CKS1BP1-201ENST00000555221 240 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 ADAD1P2-201ENST00000588476 646 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 MIR6768-201ENST00000610734 72 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 uc_338.9-201ENST00000617424 182 ntBASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP54Q7Z3B4 AL359715.3-201ENST00000569267 2123 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms