Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 OR8G3P-201ENST00000533406 921 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC006512.2-201ENST00000543250 486 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 DPRXP4-201ENST00000578053 568 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 MIR3936-201ENST00000584304 110 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC012254.4-201ENST00000588843 273 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 MTCO2P2-201ENST00000591258 225 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AL359091.2-201ENST00000609303 556 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AL669942.2-201ENST00000620352 697 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AL683826.1-201ENST00000624104 627 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AL390318.1-201ENST00000624564 687 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 OR8G3P-202ENST00000641572 1255 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC093591.2-201ENST00000565254 3843 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AL353796.1-201ENST00000561542 3241 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 RNA5SP477-201ENST00000362639 119 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 RN7SKP171-201ENST00000364417 303 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 SUGT1P2-201ENST00000379452 992 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 CTSL3P-202ENST00000412179 788 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC006335.2-201ENST00000437993 330 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 TPTE2P3-201ENST00000441562 1189 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 EXOSC3P1-201ENST00000448649 500 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC245028.2-201ENST00000458673 253 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 RPS3AP6-201ENST00000484430 795 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 SUMO2P4-201ENST00000504193 276 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC025458.1-201ENST00000506046 166 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC108120.2-201ENST00000512973 294 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 OR5H7P-201ENST00000514084 930 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 RN7SKP141-201ENST00000516167 338 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 CDC42P3-201ENST00000518493 633 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AP001207.2-201ENST00000519490 539 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 HIGD1AP18-201ENST00000520730 278 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC027369.2-201ENST00000528030 440 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 NMNAT1P5-201ENST00000559657 841 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 LINC00556-201ENST00000569603 412 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 MTATP6P24-201ENST00000576835 677 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AP005403.1-201ENST00000579720 229 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AL445435.1-201ENST00000604232 665 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AL356863.1-201ENST00000623378 1080 ntBASIC4.92□□□□□ -1.62
SHFQ7M4L6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SHFQ7M4L6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms