Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AC023813.2-201ENST00000564321 469 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AGGF1P6-201ENST00000569213 976 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AL078601.3-201ENST00000573303 535 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AL353778.1-201ENST00000603149 408 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 MTND3P19-201ENST00000603825 345 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 NANOGP3-201ENST00000605855 286 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AC007349.4-201ENST00000608114 532 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 OR2BH1P-201ENST00000608850 864 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AC096586.1-201ENST00000610267 561 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AC017037.3-201ENST00000625016 472 ntBASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCHD4Q6ZW05 HSPA8P17-201ENST00000427029 1382 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 STX3-208ENST00000641815 3236 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 VPS35P1-201ENST00000563400 1518 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 RNU4-51P-201ENST00000364206 140 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 YWHAZP6-201ENST00000399764 738 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 RPS7P9-201ENST00000414704 586 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 RPSAP65-201ENST00000429660 595 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 NANOGP2-201ENST00000435391 727 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AL117351.1-201ENST00000438864 766 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 RPS7P3-201ENST00000443360 580 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 HMGB3P6-201ENST00000444896 598 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 PSMC1P13-201ENST00000458195 985 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC008629.2-201ENST00000503783 483 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC091951.3-201ENST00000504093 246 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC010486.2-201ENST00000505572 483 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 MTCO3P28-201ENST00000513351 515 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC135279.1-201ENST00000543493 504 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AL109741.3-201ENST00000561748 592 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC069366.1-201ENST00000583159 838 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC091057.2-201ENST00000602594 792 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AL137072.1-201ENST00000603444 466 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC108865.2-201ENST00000606881 432 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AL138478.1-201ENST00000612252 832 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 uc_338.29-201ENST00000615099 168 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 AC024023.1-201ENST00000624530 922 ntBASIC5.29□□□□□ -1.56
PTCHD4Q6ZW05 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms