Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RGS17P1-201ENST00000423358 553 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 OR5M13P-201ENST00000433944 937 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC104306.1-201ENST00000449702 371 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 RPL26P30-201ENST00000453533 435 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 RN7SL706P-201ENST00000460079 292 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 RN7SL635P-201ENST00000492123 296 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC113352.1-201ENST00000513196 666 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC022559.1-201ENST00000520905 205 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 IGHV3-76-201ENST00000522465 295 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC126177.6-201ENST00000550420 1009 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 BBIP1P1-201ENST00000602999 279 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC103858.2-201ENST00000621471 543 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 FHL1-203ENST00000370676 833 ntTSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 SNORA75B-201ENST00000384053 137 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 RNU6-890P-201ENST00000384121 107 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 SNORD37.1-201ENST00000390968 65 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 ATP5HP3-201ENST00000396994 486 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 RPL21P1-201ENST00000399532 476 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 RPS20P2-201ENST00000402520 389 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 ZNF37CP-201ENST00000406795 241 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 RNU2-20P-201ENST00000410425 191 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 RPS26P13-201ENST00000419030 330 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 SKA2P1-201ENST00000425592 390 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC244505.2-201ENST00000435089 759 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 LSM1P1-201ENST00000438629 273 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 AL353754.1-201ENST00000440219 340 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 MED28P3-201ENST00000444288 531 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 RPL21P99-201ENST00000480369 423 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC091965.3-201ENST00000506236 208 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 OR5D17P-201ENST00000531492 978 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 DNM1P31-201ENST00000564149 696 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 IGHV3-29-201ENST00000604817 344 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 PISRT1.1-201ENST00000616930 107 ntBASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC103564.3-201ENST00000621194 220 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms