Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC044860.2-201ENST00000561005 179 ntBASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 AP001521.2-201ENST00000608772 546 ntBASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 AC087385.3-201ENST00000620477 187 ntBASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 AC243960.7-201ENST00000623532 707 ntBASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 IRF5P1-201ENST00000504852 2164 ntBASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN20Q4JDL3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AC008549.2-201ENST00000333482 706 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 EI24P3-201ENST00000399046 1062 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AL589647.1-201ENST00000402485 466 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 CTSL3P-202ENST00000412179 788 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AL645608.4-201ENST00000423619 154 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 RN7SL558P-201ENST00000497468 299 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 RNA5SP249-201ENST00000516127 99 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 RNU6-709P-201ENST00000517257 104 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AC013244.1-201ENST00000604279 193 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AC133644.2-201ENST00000608142 540 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AC010809.3-201ENST00000621310 641 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 AC093849.1-201ENST00000563631 2209 ntBASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
PTPN20Q4JDL3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 RNU6-249P-201ENST00000363016 102 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 SNORA51.8-201ENST00000384234 132 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 U3.30-201ENST00000391308 210 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AC013268.2-201ENST00000420753 337 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 RHEBP2-201ENST00000450289 600 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 RN7SL214P-201ENST00000487317 265 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 GAPDHP56-201ENST00000506031 988 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AC021006.3-201ENST00000530771 192 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AC093249.4-201ENST00000564755 259 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 SNORA74C-1-201ENST00000580726 201 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AP000919.1-201ENST00000582850 985 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AC090510.2-201ENST00000617465 629 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 CR381572.2-201ENST00000624852 397 ntBASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN20Q4JDL3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PTPN20Q4JDL3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN20Q4JDL3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN20Q4JDL3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN20Q4JDL3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PTPN20Q4JDL3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN20Q4JDL3 AC005522.1-201ENST00000395416 346 ntBASIC5.1□□□□□ -1.59
PTPN20Q4JDL3 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN20Q4JDL3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms