Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AC107075.1-201ENST00000613695 314 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX6-1P78426 OR8B1P-202ENST00000641132 1178 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
NKX6-1P78426 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 AL121768.1-201ENST00000613917 2544 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 MRE11P1-201ENST00000464884 2127 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
NKX6-1P78426 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
NKX6-1P78426 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
NKX6-1P78426 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NKX6-1P78426 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NKX6-1P78426 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX6-1P78426 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC105235.1-201ENST00000623208 1816 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX6-1P78426 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NKX6-1P78426 OR5H2-201ENST00000355273 945 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NKX6-1P78426 RNU6-560P-201ENST00000364007 108 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 SNORA51.12-201ENST00000384448 134 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 MIR16-1-201ENST00000385271 89 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 RNU11-201ENST00000387069 134 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 U3.43-201ENST00000410734 213 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC006960.1-201ENST00000419980 153 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 TNPO1P1-201ENST00000423641 1138 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 RPL7P4-203ENST00000430239 730 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AL365396.1-201ENST00000430854 671 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC112492.2-201ENST00000432774 1030 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC094019.1-201ENST00000434678 472 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AL590399.4-201ENST00000436561 601 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC092809.1-201ENST00000441469 474 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NKX6-1P78426 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 HMGB1P16-201ENST00000447155 540 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 HLA-DPA3-207ENST00000454398 229 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 PRDX3P4-201ENST00000470828 747 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 RN7SL714P-201ENST00000487050 298 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC104971.1-201ENST00000495117 578 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 NPM1P27-201ENST00000502784 830 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC117522.2-201ENST00000510049 657 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 OR5H4P-201ENST00000510851 923 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX6-1P78426 MRPS33P3-201ENST00000513456 322 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 RNA5SP206-201ENST00000516703 121 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 COX6B1P6-201ENST00000522347 255 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NKX6-1P78426 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AL121579.2-201ENST00000555466 590 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC092332.1-201ENST00000563684 829 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.47□□□□□ -1.53
NKX6-1P78426 AC005332.4-201ENST00000592752 579 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.47□□□□□ -1.53
NKX6-1P78426 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NKX6-1P78426 AL360012.1-201ENST00000602813 131 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AL109653.1-201ENST00000603091 248 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 Z99497.2-201ENST00000603634 310 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 HIRAP1-201ENST00000605318 787 ntBASIC5.47□□□□□ -1.53
NKX6-1P78426 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms