Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.31□□□□□ -1.72
LMO4P61968 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.31□□□□□ -1.72
LMO4P61968 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.31□□□□□ -1.72
LMO4P61968 AC133794.1-201ENST00000602731 914 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AC108738.1-201ENST00000603703 237 ntBASIC4.31□□□□□ -1.72
LMO4P61968 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.31□□□□□ -1.72
LMO4P61968 AC120053.1-201ENST00000607706 736 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AL136295.6-201ENST00000610486 658 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AC105105.5-201ENST00000622635 1294 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AL138955.1-201ENST00000622881 1040 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AC091905.4-201ENST00000623432 202 ntBASIC4.31□□□□□ -1.72
LMO4P61968 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LMO4P61968 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LMO4P61968 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.31□□□□□ -1.72
LMO4P61968 NXF4-202ENST00000416098 1465 ntBASIC4.3□□□□□ -1.72
LMO4P61968 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.3□□□□□ -1.72
LMO4P61968 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
LMO4P61968 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LMO4P61968 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
LMO4P61968 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.3□□□□□ -1.72
LMO4P61968 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
LMO4P61968 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 RN7SKP103-201ENST00000363848 320 ntBASIC4.3□□□□□ -1.72
LMO4P61968 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LMO4P61968 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 AL035405.1-201ENST00000400795 710 ntBASIC4.3□□□□□ -1.72
LMO4P61968 ST13P16-201ENST00000401760 781 ntBASIC4.3□□□□□ -1.72
LMO4P61968 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AL133482.1-201ENST00000415988 498 ntBASIC4.3□□□□□ -1.72
LMO4P61968 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 MTCO2P1-201ENST00000424648 477 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 FTLP19-201ENST00000433300 394 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AL161722.2-201ENST00000434731 981 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 SUMO2P1-206ENST00000445436 284 ntBASIC4.3□□□□□ -1.72
LMO4P61968 RPL31P44-201ENST00000447680 377 ntBASIC4.3□□□□□ -1.72
LMO4P61968 TRY2P-201ENST00000448860 689 ntBASIC4.3□□□□□ -1.72
LMO4P61968 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 MTND2P30-201ENST00000456663 382 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 RPS3AP6-201ENST00000484430 795 ntBASIC4.3□□□□□ -1.72
LMO4P61968 TRAV31-201ENST00000502780 342 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.3□□□□□ -1.72
LMO4P61968 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.3□□□□□ -1.72
LMO4P61968 AC027338.1-201ENST00000514840 825 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.3□□□□□ -1.72
LMO4P61968 RN7SKP260-201ENST00000516907 149 ntBASIC4.3□□□□□ -1.72
LMO4P61968 Y_RNA.717-201ENST00000517106 92 ntBASIC4.3□□□□□ -1.72
LMO4P61968 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.3□□□□□ -1.72
LMO4P61968 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 BRD9P1-201ENST00000529855 560 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC068339.2-201ENST00000534395 618 ntBASIC4.3□□□□□ -1.72
LMO4P61968 PCNPP1-201ENST00000552501 511 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.3□□□□□ -1.72
LMO4P61968 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.3□□□□□ -1.72
LMO4P61968 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 MIR3934-201ENST00000579806 107 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 AC006116.7-201ENST00000590141 756 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AL158050.2-201ENST00000605336 568 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AL451049.1-201ENST00000608672 497 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC093388.1-201ENST00000609166 430 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.3□□□□□ -1.72
LMO4P61968 AC100827.5-201ENST00000615883 426 ntBASIC4.3□□□□□ -1.72
LMO4P61968 RMST_5.1-201ENST00000618704 126 ntBASIC4.3□□□□□ -1.72
LMO4P61968 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.3□□□□□ -1.72
LMO4P61968 AC068057.2-201ENST00000624047 895 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AL109659.3-201ENST00000624985 950 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AL356118.1-201ENST00000635272 1078 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AC000095.2-202ENST00000637415 154 ntBASIC4.3□□□□□ -1.72
LMO4P61968 AL445984.1-201ENST00000637834 659 ntBASIC4.3□□□□□ -1.72
LMO4P61968 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.3□□□□□ -1.72
LMO4P61968 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LMO4P61968 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LMO4P61968 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms