Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH6P55285 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH6P55285 AL672167.1-204ENST00000641875 3017 ntBASIC5.14□□□□□ -1.59
CDH6P55285 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH6P55285 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH6P55285 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 RNU6-167P-201ENST00000384292 106 ntBASIC5.14□□□□□ -1.59
CDH6P55285 RNU1-106P-201ENST00000384382 164 ntBASIC5.14□□□□□ -1.59
CDH6P55285 MIR765-201ENST00000390226 114 ntBASIC5.14□□□□□ -1.59
CDH6P55285 Z97832.1-201ENST00000402490 328 ntBASIC5.14□□□□□ -1.59
CDH6P55285 MIR1178-201ENST00000408396 91 ntBASIC5.14□□□□□ -1.59
CDH6P55285 CTSL3P-202ENST00000412179 788 ntBASIC5.14□□□□□ -1.59
CDH6P55285 BMS1P13-201ENST00000417301 885 ntBASIC5.14□□□□□ -1.59
CDH6P55285 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH6P55285 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH6P55285 AC239798.3-201ENST00000454459 408 ntBASIC5.14□□□□□ -1.59
CDH6P55285 AC026348.1-201ENST00000462549 1053 ntBASIC5.14□□□□□ -1.59
CDH6P55285 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH6P55285 AC074386.1-201ENST00000476560 767 ntBASIC5.14□□□□□ -1.59
CDH6P55285 RPS4XP14-201ENST00000493072 781 ntBASIC5.14□□□□□ -1.59
CDH6P55285 AC093763.2-201ENST00000505334 1223 ntBASIC5.14□□□□□ -1.59
CDH6P55285 RN7SKP66-201ENST00000516681 231 ntBASIC5.14□□□□□ -1.59
CDH6P55285 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH6P55285 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH6P55285 SETP1-201ENST00000556014 845 ntBASIC5.14□□□□□ -1.59
CDH6P55285 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH6P55285 AP005262.1-201ENST00000582646 997 ntBASIC5.14□□□□□ -1.59
CDH6P55285 MIR4691-201ENST00000583764 85 ntBASIC5.14□□□□□ -1.59
CDH6P55285 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.14□□□□□ -1.59
CDH6P55285 AC019206.1-201ENST00000621938 425 ntBASIC5.14□□□□□ -1.59
CDH6P55285 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.14□□□□□ -1.59
CDH6P55285 AC009950.2-201ENST00000636548 183 ntBASIC5.14□□□□□ -1.59
CDH6P55285 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH6P55285 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH6P55285 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.14□□□□□ -1.59
CDH6P55285 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CDH6P55285 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH6P55285 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH6P55285 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH6P55285 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDH6P55285 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 THAP12P5-201ENST00000405864 2275 ntBASIC5.13□□□□□ -1.59
CDH6P55285 HSPA8P18-201ENST00000439846 1928 ntBASIC5.13□□□□□ -1.59
CDH6P55285 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH6P55285 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH6P55285 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
CDH6P55285 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CDH6P55285 AC003985.2-201ENST00000562268 1669 ntBASIC5.13□□□□□ -1.59
CDH6P55285 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 RNA5SP428-201ENST00000365129 132 ntBASIC5.13□□□□□ -1.59
CDH6P55285 RPL10P10-201ENST00000403509 664 ntBASIC5.13□□□□□ -1.59
CDH6P55285 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH6P55285 AF186996.5-201ENST00000418098 904 ntBASIC5.13□□□□□ -1.59
CDH6P55285 PTP4A1P1-201ENST00000420539 515 ntBASIC5.13□□□□□ -1.59
CDH6P55285 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH6P55285 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 AL137845.2-201ENST00000444292 988 ntBASIC5.13□□□□□ -1.59
CDH6P55285 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH6P55285 OR52Y1P-201ENST00000452418 828 ntBASIC5.13□□□□□ -1.59
CDH6P55285 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH6P55285 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH6P55285 AC016687.1-201ENST00000482574 353 ntBASIC5.13□□□□□ -1.59
CDH6P55285 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.13□□□□□ -1.59
CDH6P55285 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CDH6P55285 AC008953.1-201ENST00000497334 318 ntBASIC5.13□□□□□ -1.59
CDH6P55285 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH6P55285 AC004980.4-201ENST00000513375 203 ntBASIC5.13□□□□□ -1.59
CDH6P55285 ENPP7P9-201ENST00000514456 627 ntBASIC5.13□□□□□ -1.59
CDH6P55285 AC027308.1-201ENST00000517993 110 ntBASIC5.13□□□□□ -1.59
CDH6P55285 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH6P55285 HNRNPRP2-201ENST00000528421 743 ntBASIC5.13□□□□□ -1.59
CDH6P55285 EIF4A2P5-201ENST00000529914 499 ntBASIC5.13□□□□□ -1.59
CDH6P55285 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH6P55285 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH6P55285 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.13□□□□□ -1.59
CDH6P55285 OR7E18P-201ENST00000592589 702 ntBASIC5.13□□□□□ -1.59
CDH6P55285 AC093799.2-201ENST00000610062 578 ntBASIC5.13□□□□□ -1.59
CDH6P55285 AC006840.1-201ENST00000623069 542 ntBASIC5.13□□□□□ -1.59
CDH6P55285 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH6P55285 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CDH6P55285 AC009643.2-201ENST00000603543 1448 ntBASIC5.13□□□□□ -1.59
CDH6P55285 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.13□□□□□ -1.59
CDH6P55285 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDH6P55285 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms