Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VCPP55072 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VCPP55072 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VCPP55072 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VCPP55072 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VCPP55072 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VCPP55072 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
VCPP55072 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.56□□□□□ -1.52
VCPP55072 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.56□□□□□ -1.52
VCPP55072 OR9G4-201ENST00000302957 984 ntBASIC5.56□□□□□ -1.52
VCPP55072 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.56□□□□□ -1.52
VCPP55072 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VCPP55072 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.56□□□□□ -1.52
VCPP55072 RNU6-167P-201ENST00000384292 106 ntBASIC5.56□□□□□ -1.52
VCPP55072 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.56□□□□□ -1.52
VCPP55072 NPM1P40-201ENST00000412758 733 ntBASIC5.56□□□□□ -1.52
VCPP55072 MTND4LP21-201ENST00000415303 295 ntBASIC5.56□□□□□ -1.52
VCPP55072 PRPF38AP1-201ENST00000451976 933 ntBASIC5.56□□□□□ -1.52
VCPP55072 AC104634.1-201ENST00000452720 462 ntBASIC5.56□□□□□ -1.52
VCPP55072 RPS23P7-201ENST00000466210 444 ntBASIC5.56□□□□□ -1.52
VCPP55072 AC092754.1-201ENST00000472975 479 ntBASIC5.56□□□□□ -1.52
VCPP55072 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.56□□□□□ -1.52
VCPP55072 EIF3KP3-201ENST00000514461 639 ntBASIC5.56□□□□□ -1.52
VCPP55072 IGKV2D-10-201ENST00000520194 281 ntBASIC5.56□□□□□ -1.52
VCPP55072 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.56□□□□□ -1.52
VCPP55072 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.56□□□□□ -1.52
VCPP55072 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.56□□□□□ -1.52
VCPP55072 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.56□□□□□ -1.52
VCPP55072 AC040958.1-201ENST00000561102 201 ntBASIC5.56□□□□□ -1.52
VCPP55072 AC136624.4-201ENST00000573044 370 ntBASIC5.56□□□□□ -1.52
VCPP55072 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.56□□□□□ -1.52
VCPP55072 PRPF19P1-201ENST00000584766 898 ntBASIC5.56□□□□□ -1.52
VCPP55072 AC006272.2-201ENST00000594725 163 ntBASIC5.56□□□□□ -1.52
VCPP55072 AC093799.2-201ENST00000610062 578 ntBASIC5.56□□□□□ -1.52
VCPP55072 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.56□□□□□ -1.52
VCPP55072 AC008833.1-201ENST00000611633 691 ntBASIC5.56□□□□□ -1.52
VCPP55072 AC074101.1-201ENST00000637861 241 ntBASIC5.56□□□□□ -1.52
VCPP55072 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.56□□□□□ -1.52
VCPP55072 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VCPP55072 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VCPP55072 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 MIPEPP2-201ENST00000422560 1819 ntBASIC5.55□□□□□ -1.52
VCPP55072 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VCPP55072 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 RN7SKP149-201ENST00000363008 344 ntBASIC5.55□□□□□ -1.52
VCPP55072 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 MIR105-1-201ENST00000385222 81 ntBASIC5.55□□□□□ -1.52
VCPP55072 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VCPP55072 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.55□□□□□ -1.52
VCPP55072 RPL12P9-201ENST00000412942 488 ntBASIC5.55□□□□□ -1.52
VCPP55072 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.55□□□□□ -1.52
VCPP55072 OR2AM1P-201ENST00000422137 422 ntBASIC5.55□□□□□ -1.52
VCPP55072 AC007064.3-201ENST00000422608 359 ntBASIC5.55□□□□□ -1.52
VCPP55072 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.55□□□□□ -1.52
VCPP55072 AC090018.1-201ENST00000434369 367 ntBASIC5.55□□□□□ -1.52
VCPP55072 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.55□□□□□ -1.52
VCPP55072 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.55□□□□□ -1.52
VCPP55072 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.55□□□□□ -1.52
VCPP55072 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 AC093827.1-201ENST00000480094 861 ntBASIC5.55□□□□□ -1.52
VCPP55072 AC016687.1-201ENST00000482574 353 ntBASIC5.55□□□□□ -1.52
VCPP55072 OR11I1P-201ENST00000486033 954 ntBASIC5.55□□□□□ -1.52
VCPP55072 RPL23AP72-201ENST00000492447 435 ntBASIC5.55□□□□□ -1.52
VCPP55072 AGGF1P3-201ENST00000493675 1213 ntBASIC5.55□□□□□ -1.52
VCPP55072 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
VCPP55072 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.55□□□□□ -1.52
VCPP55072 LSM3P2-201ENST00000551246 273 ntBASIC5.55□□□□□ -1.52
VCPP55072 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.55□□□□□ -1.52
VCPP55072 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.55□□□□□ -1.52
VCPP55072 AP000919.1-201ENST00000582850 985 ntBASIC5.55□□□□□ -1.52
VCPP55072 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.55□□□□□ -1.52
VCPP55072 AC011487.3-201ENST00000593607 453 ntBASIC5.55□□□□□ -1.52
VCPP55072 AL031320.1-201ENST00000604177 357 ntBASIC5.55□□□□□ -1.52
VCPP55072 AC009027.1-201ENST00000604510 479 ntBASIC5.55□□□□□ -1.52
VCPP55072 AC067838.1-201ENST00000606064 577 ntBASIC5.55□□□□□ -1.52
VCPP55072 AC099494.2-201ENST00000623371 978 ntBASIC5.55□□□□□ -1.52
VCPP55072 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VCPP55072 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.55□□□□□ -1.52
VCPP55072 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.55□□□□□ -1.52
VCPP55072 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VCPP55072 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VCPP55072 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.55□□□□□ -1.52
VCPP55072 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.55□□□□□ -1.52
VCPP55072 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
VCPP55072 IRF5P1-201ENST00000504852 2164 ntBASIC5.55□□□□□ -1.52
VCPP55072 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.55□□□□□ -1.52
VCPP55072 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VCPP55072 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms