Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.35□□□□□ -1.39
EPHB3P54753 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.35□□□□□ -1.39
EPHB3P54753 MRPL35P2-201ENST00000448009 511 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AL445665.1-202ENST00000452436 324 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 GEMIN2P1-201ENST00000454246 752 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 RN7SL269P-201ENST00000467795 305 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AC023245.1-201ENST00000468501 517 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AC104763.1-201ENST00000475274 360 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 RPS27AP16-201ENST00000492222 470 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 ARL4AP1-201ENST00000503220 705 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 RNU6-943P-201ENST00000516960 98 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 NDUFA5P2-201ENST00000519723 344 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.35□□□□□ -1.39
EPHB3P54753 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.35□□□□□ -1.39
EPHB3P54753 KCTD9P4-201ENST00000526766 1166 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 GTF2IP11-201ENST00000526931 420 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.35□□□□□ -1.39
EPHB3P54753 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.35□□□□□ -1.39
EPHB3P54753 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.35□□□□□ -1.39
EPHB3P54753 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.35□□□□□ -1.39
EPHB3P54753 MIR4789-201ENST00000577469 82 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.35□□□□□ -1.39
EPHB3P54753 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.35□□□□□ -1.39
EPHB3P54753 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 SLC25A36P1-201ENST00000590111 465 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC6.35□□□□□ -1.39
EPHB3P54753 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.35□□□□□ -1.39
EPHB3P54753 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AL021368.3-201ENST00000607119 578 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AC004223.4-201ENST00000612426 332 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AL162574.1-201ENST00000615702 950 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 FRG1HP-204ENST00000617940 757 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AC009509.4-201ENST00000619202 509 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
EPHB3P54753 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 AC015689.2-201ENST00000528172 1738 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
EPHB3P54753 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
EPHB3P54753 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.34□□□□□ -1.39
EPHB3P54753 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 AC106872.5-201ENST00000508856 1416 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC092724.1-201ENST00000624623 3397 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 NEPNP-201ENST00000404786 1371 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.34□□□□□ -1.39
EPHB3P54753 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.34□□□□□ -1.39
EPHB3P54753 MAPK10-270ENST00000641102 3538 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
EPHB3P54753 RN7SKP128-201ENST00000364270 303 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
EPHB3P54753 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 RNU6-157P-201ENST00000383957 107 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
EPHB3P54753 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 RPS3AP2-201ENST00000407190 754 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AL354890.1-201ENST00000413730 346 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 RPS7P9-201ENST00000414704 586 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AC096644.3-201ENST00000416788 338 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC098592.1-201ENST00000419352 333 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 BX119321.1-201ENST00000428912 797 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
EPHB3P54753 BMS1P10-201ENST00000443754 1120 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.34□□□□□ -1.39
EPHB3P54753 SEPT14P24-201ENST00000447236 180 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.34□□□□□ -1.39
EPHB3P54753 RPL23AP60-201ENST00000450011 454 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AC233982.1-201ENST00000451247 436 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC126182.1-201ENST00000478134 357 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.34□□□□□ -1.39
EPHB3P54753 CBX3P3-201ENST00000508108 532 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 AC109458.1-201ENST00000508858 316 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AC010285.3-201ENST00000511668 676 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 RNA5SP303-201ENST00000516192 130 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.34□□□□□ -1.39
EPHB3P54753 C1GALT1P3-201ENST00000522049 819 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 HIGD1AP10-201ENST00000527837 282 ntBASIC6.34□□□□□ -1.39
EPHB3P54753 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms