Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 FTX-215ENST00000638681 9771 ntTSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 ELP2-205ENST00000442325 2722 ntTSL 2 BASIC8.42□□□□□ -1.06
NUBP1P53384 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 RNA5SP218-201ENST00000363188 109 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 Y_RNA.183-201ENST00000363882 113 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 ARMCX7P-201ENST00000372828 562 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 SNORA16.2-201ENST00000390991 127 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 AL603910.2-201ENST00000407268 136 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.42□□□□□ -1.06
NUBP1P53384 ATP5LP2-201ENST00000440646 311 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 RPL23AP31-201ENST00000456160 467 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 RN7SL308P-201ENST00000464971 297 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC8.42□□□□□ -1.06
NUBP1P53384 AC114300.1-201ENST00000502347 280 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 AC093853.1-201ENST00000515689 483 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.42□□□□□ -1.06
NUBP1P53384 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.42□□□□□ -1.06
NUBP1P53384 AL121576.1-201ENST00000556055 276 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 AC013452.1-201ENST00000560630 598 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.42□□□□□ -1.06
NUBP1P53384 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC8.42□□□□□ -1.06
NUBP1P53384 NANOGP3-201ENST00000605855 286 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 AC023813.4-201ENST00000607580 580 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 CDH23-213ENST00000619887 4224 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 KYNUP1-201ENST00000466683 1406 ntBASIC8.42□□□□□ -1.06
NUBP1P53384 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
NUBP1P53384 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC8.41□□□□□ -1.06
NUBP1P53384 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC8.41□□□□□ -1.06
NUBP1P53384 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.41□□□□□ -1.06
NUBP1P53384 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
NUBP1P53384 ASH2L-207ENST00000521652 2433 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 AC007038.1-201ENST00000452057 2199 ntTSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 ZNF280A-201ENST00000302097 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC8.41□□□□□ -1.06
NUBP1P53384 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
NUBP1P53384 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
NUBP1P53384 Y_RNA.471-201ENST00000384312 102 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 MIR625-201ENST00000385047 85 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
NUBP1P53384 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.41□□□□□ -1.06
NUBP1P53384 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC8.41□□□□□ -1.06
NUBP1P53384 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
NUBP1P53384 RPS3AP46-201ENST00000448352 682 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC8.41□□□□□ -1.06
NUBP1P53384 AC019080.2-201ENST00000453859 394 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC8.41□□□□□ -1.06
NUBP1P53384 RPL34P22-201ENST00000468193 318 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 AC005550.2-201ENST00000476382 318 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 RPL7AP30-201ENST00000482859 796 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC8.41□□□□□ -1.06
NUBP1P53384 AC112484.3-201ENST00000505910 329 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 MRPL49P1-201ENST00000505951 535 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 AC112203.1-201ENST00000506315 1020 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 RNU6-1278P-201ENST00000516130 107 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 AP002392.1-201ENST00000537692 208 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC8.41□□□□□ -1.06
NUBP1P53384 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC8.41□□□□□ -1.06
NUBP1P53384 DNM1P34-202ENST00000567850 315 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC8.41□□□□□ -1.06
NUBP1P53384 MIR4518-201ENST00000580665 83 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 RN7SL619P-201ENST00000581753 258 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 BNIP3P15-201ENST00000604600 301 ntBASIC8.41□□□□□ -1.06
NUBP1P53384 AC008162.1-201ENST00000604718 254 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms