Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC006840.1-201ENST00000623069 542 ntBASIC5.36□□□□□ -1.55
CHRNA3P32297 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA3P32297 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA3P32297 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.36□□□□□ -1.55
CHRNA3P32297 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA3P32297 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHRNA3P32297 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CHRNA3P32297 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA3P32297 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CHRNA3P32297 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.36□□□□□ -1.55
CHRNA3P32297 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CHRNA3P32297 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.36□□□□□ -1.55
CHRNA3P32297 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CHRNA3P32297 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA3P32297 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA3P32297 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CHRNA3P32297 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA3P32297 AC092747.4-201ENST00000620519 1861 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA3P32297 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA3P32297 AC011447.7-201ENST00000624228 1590 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 TCP1P3-201ENST00000414406 1498 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 SNORA17.1-201ENST00000362945 126 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA3P32297 HMGB3P7-201ENST00000400214 611 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 RN7SKP213-201ENST00000410746 298 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA3P32297 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA3P32297 SETP10-201ENST00000424368 814 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 RPS4XP12-201ENST00000461747 709 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 RPSAP50-201ENST00000481955 852 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA3P32297 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA3P32297 RPL23AP53-201ENST00000521854 457 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.35□□□□□ -1.55
CHRNA3P32297 AC005000.1-201ENST00000536192 288 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 AC024940.3-201ENST00000538551 316 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA3P32297 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.35□□□□□ -1.55
CHRNA3P32297 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA3P32297 AP005131.7-201ENST00000610087 611 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 MIR7155-201ENST00000615925 56 ntBASIC5.35□□□□□ -1.55
CHRNA3P32297 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA3P32297 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA3P32297 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA3P32297 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA3P32297 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA3P32297 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA3P32297 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA3P32297 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.35□□□□□ -1.55
CHRNA3P32297 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA3P32297 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CHRNA3P32297 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA3P32297 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA3P32297 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA3P32297 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA3P32297 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA3P32297 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA3P32297 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CHRNA3P32297 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA3P32297 MT-RNR1-201ENST00000389680 954 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CHRNA3P32297 RNA5SP105-201ENST00000391123 113 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 U3.36-201ENST00000408418 213 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 RN7SKP126-201ENST00000411143 300 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA3P32297 RPS29P10-201ENST00000439197 166 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA3P32297 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA3P32297 AC091180.1-201ENST00000462104 372 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 AC009127.1-201ENST00000467090 155 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 AC008410.1-201ENST00000483777 339 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 RPL32P9-201ENST00000487963 407 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA3P32297 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA3P32297 GTF2F2P1-201ENST00000511083 675 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 RNA5SP303-201ENST00000516192 130 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA3P32297 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA3P32297 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
CHRNA3P32297 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA3P32297 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA3P32297 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.34□□□□□ -1.55
CHRNA3P32297 TAS2R6P-201ENST00000605022 826 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 AL592494.3-201ENST00000609485 464 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 AC015922.4-201ENST00000612568 690 ntBASIC5.34□□□□□ -1.55
CHRNA3P32297 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CHRNA3P32297 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.34□□□□□ -1.55
CHRNA3P32297 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA3P32297 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CHRNA3P32297 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA3P32297 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA3P32297 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA3P32297 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.34□□□□□ -1.56
CHRNA3P32297 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
CHRNA3P32297 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.34□□□□□ -1.56
CHRNA3P32297 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.33□□□□□ -1.56
CHRNA3P32297 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms