Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 RPL35AP21-201ENST00000437667 333 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 PTMAP6-201ENST00000439110 327 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 BTF3P6-201ENST00000448054 499 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 AL691482.1-201ENST00000453255 87 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC009127.1-201ENST00000467090 155 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 RN7SL222P-201ENST00000476452 299 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 RN7SL727P-201ENST00000482164 296 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 RPL32P9-201ENST00000487963 407 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 BTG4P1-201ENST00000510421 183 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC022832.1-201ENST00000530718 645 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC134349.2-201ENST00000535136 910 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC005868.1-201ENST00000536421 331 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 NDUFB4P11-201ENST00000560510 395 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC022106.2-201ENST00000620114 757 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC074140.1-201ENST00000621617 208 ntBASIC3.83□□□□□ -1.8
HLA-DMBP28068 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DMBP28068 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DMBP28068 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DMBP28068 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMBP28068 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMBP28068 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMBP28068 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMBP28068 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 AC092111.2-201ENST00000611627 1414 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMBP28068 MIR1182-201ENST00000408363 97 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 RN7SKP213-201ENST00000410746 298 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 AC007738.1-201ENST00000413892 348 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 RPL23AP27-201ENST00000415161 451 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 AL358176.3-201ENST00000420757 454 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 AL034379.1-201ENST00000423216 253 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 TXNP5-201ENST00000441043 315 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMBP28068 AL591363.1-201ENST00000450091 483 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 RPSAP50-201ENST00000481955 852 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 AC138938.1-201ENST00000515431 782 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 RN7SKP46-201ENST00000515942 234 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMBP28068 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 HMGN2P6-201ENST00000551091 273 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 AGGF1P9-201ENST00000561884 913 ntBASIC3.82□□□□□ -1.8
HLA-DMBP28068 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DMBP28068 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DMBP28068 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMBP28068 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC068446.1-201ENST00000556425 1549 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMBP28068 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DMBP28068 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DMBP28068 U3.2-201ENST00000362981 210 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 AL353625.1-202ENST00000366273 571 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 SNORA70.10-201ENST00000384515 134 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 DUTP5-201ENST00000406790 469 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 RNU2-22P-201ENST00000411266 212 ntBASIC3.81□□□□□ -1.8
HLA-DMBP28068 RN7SKP273-201ENST00000411392 314 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms