Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
RFX1P22670 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.49□□□□□ -1.21
RFX1P22670 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RFX1P22670 AC020658.2-201ENST00000559030 4020 ntBASIC7.49□□□□□ -1.21
RFX1P22670 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 RN7SKP47-201ENST00000365347 328 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AC002524.1-201ENST00000411687 547 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AL136133.1-201ENST00000413694 376 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AC245052.5-201ENST00000416320 649 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 AC006509.1-201ENST00000420788 634 ntBASIC7.49□□□□□ -1.21
RFX1P22670 RPS27AP14-201ENST00000422868 454 ntBASIC7.49□□□□□ -1.21
RFX1P22670 GLRXP1-201ENST00000423261 334 ntBASIC7.49□□□□□ -1.21
RFX1P22670 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 HSPD1P12-201ENST00000429127 1069 ntBASIC7.49□□□□□ -1.21
RFX1P22670 MTCO3P21-201ENST00000430791 643 ntBASIC7.49□□□□□ -1.21
RFX1P22670 BMS1P19-201ENST00000433925 393 ntBASIC7.49□□□□□ -1.21
RFX1P22670 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.49□□□□□ -1.21
RFX1P22670 AL121601.2-201ENST00000438019 707 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC7.49□□□□□ -1.21
RFX1P22670 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.49□□□□□ -1.21
RFX1P22670 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.49□□□□□ -1.21
RFX1P22670 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.49□□□□□ -1.21
RFX1P22670 RPL7P36-201ENST00000444633 681 ntBASIC7.49□□□□□ -1.21
RFX1P22670 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.49□□□□□ -1.21
RFX1P22670 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.49□□□□□ -1.21
RFX1P22670 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.49□□□□□ -1.21
RFX1P22670 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
RFX1P22670 LARP1BP2-201ENST00000486594 519 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AL358832.1-201ENST00000497800 389 ntBASIC7.49□□□□□ -1.21
RFX1P22670 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 RNU6-583P-201ENST00000516012 92 ntBASIC7.49□□□□□ -1.21
RFX1P22670 RNU6-528P-201ENST00000516926 100 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AC092375.1-201ENST00000550410 637 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.49□□□□□ -1.21
RFX1P22670 BGLT3-201ENST00000564523 994 ntBASIC7.49□□□□□ -1.21
RFX1P22670 RN7SL199P-201ENST00000578752 281 ntBASIC7.49□□□□□ -1.21
RFX1P22670 RN7SL656P-201ENST00000579044 281 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC7.49□□□□□ -1.21
RFX1P22670 RN7SL404P-201ENST00000582421 281 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.49□□□□□ -1.21
RFX1P22670 MIR4719-201ENST00000585233 84 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 AC090236.2-201ENST00000587933 1101 ntBASIC7.49□□□□□ -1.21
RFX1P22670 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 LSM1P2-201ENST00000604911 322 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AC017083.3-201ENST00000609955 700 ntBASIC7.49□□□□□ -1.21
RFX1P22670 MIR6778-201ENST00000617912 73 ntBASIC7.49□□□□□ -1.21
RFX1P22670 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.49□□□□□ -1.21
RFX1P22670 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.49□□□□□ -1.21
RFX1P22670 SPATA31C1-201ENST00000420021 3895 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
RFX1P22670 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RFX1P22670 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 AC083806.2-201ENST00000617795 2685 ntBASIC7.49□□□□□ -1.21
RFX1P22670 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 AL031985.3-201ENST00000565390 2449 ntBASIC7.49□□□□□ -1.21
RFX1P22670 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 MFSD8-219ENST00000641228 2559 ntBASIC7.49□□□□□ -1.21
RFX1P22670 EIF3EP1-201ENST00000433978 1316 ntBASIC7.49□□□□□ -1.21
RFX1P22670 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
RFX1P22670 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.49□□□□□ -1.21
RFX1P22670 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 AC016251.2-201ENST00000623393 3089 ntBASIC7.48□□□□□ -1.21
RFX1P22670 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 AL121768.1-201ENST00000613917 2544 ntBASIC7.48□□□□□ -1.21
RFX1P22670 AC102941.1-201ENST00000567616 1537 ntBASIC7.48□□□□□ -1.21
RFX1P22670 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RFX1P22670 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.48□□□□□ -1.21
RFX1P22670 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RFX1P22670 Y_RNA.554-201ENST00000384672 102 ntBASIC7.48□□□□□ -1.21
RFX1P22670 MTCYBP36-201ENST00000404146 440 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms