Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FREM3P0C091 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FREM3P0C091 AC013429.2-201ENST00000418798 781 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.4□□□□□ -1.7
FREM3P0C091 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.4□□□□□ -1.7
FREM3P0C091 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.4□□□□□ -1.7
FREM3P0C091 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.4□□□□□ -1.7
FREM3P0C091 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.4□□□□□ -1.7
FREM3P0C091 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.4□□□□□ -1.7
FREM3P0C091 AC093166.2-201ENST00000455969 1017 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 AC063943.1-201ENST00000465434 453 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 RPS29P22-201ENST00000472363 168 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.4□□□□□ -1.7
FREM3P0C091 AC013356.1-201ENST00000489027 564 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 RN7SKP260-201ENST00000516907 149 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 MIR4330-201ENST00000579077 105 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 AL512782.1-201ENST00000603093 364 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.4□□□□□ -1.7
FREM3P0C091 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.4□□□□□ -1.7
FREM3P0C091 AC015914.2-201ENST00000618167 288 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 AC012414.7-202ENST00000622705 1090 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 TET1P1-201ENST00000426627 2301 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FREM3P0C091 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
FREM3P0C091 AC009643.2-201ENST00000603543 1448 ntBASIC4.4□□□□□ -1.7
FREM3P0C091 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
FREM3P0C091 AC099654.2-201ENST00000433031 1980 ntBASIC4.4□□□□□ -1.71
FREM3P0C091 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FREM3P0C091 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.4□□□□□ -1.71
FREM3P0C091 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.4□□□□□ -1.71
FREM3P0C091 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.4□□□□□ -1.71
FREM3P0C091 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FREM3P0C091 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FREM3P0C091 AL442639.1-201ENST00000625030 1899 ntBASIC4.4□□□□□ -1.71
FREM3P0C091 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FREM3P0C091 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FREM3P0C091 AL021331.1-201ENST00000402817 582 ntBASIC4.4□□□□□ -1.71
FREM3P0C091 CHEK2P3-201ENST00000416118 248 ntBASIC4.4□□□□□ -1.71
FREM3P0C091 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.4□□□□□ -1.71
FREM3P0C091 AC091180.1-201ENST00000462104 372 ntBASIC4.4□□□□□ -1.71
FREM3P0C091 AC025674.1-201ENST00000507074 324 ntBASIC4.4□□□□□ -1.71
FREM3P0C091 AC105031.1-201ENST00000518550 476 ntBASIC4.4□□□□□ -1.71
FREM3P0C091 AL390726.5-202ENST00000564800 256 ntBASIC4.4□□□□□ -1.71
FREM3P0C091 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.4□□□□□ -1.71
FREM3P0C091 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.4□□□□□ -1.71
FREM3P0C091 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.4□□□□□ -1.71
FREM3P0C091 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
FREM3P0C091 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.4□□□□□ -1.71
FREM3P0C091 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FREM3P0C091 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FREM3P0C091 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.4□□□□□ -1.71
FREM3P0C091 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
FREM3P0C091 AC000374.1-201ENST00000434698 1745 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.39□□□□□ -1.71
FREM3P0C091 AC027290.2-201ENST00000623210 18662 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.39□□□□□ -1.71
FREM3P0C091 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
FREM3P0C091 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
FREM3P0C091 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.39□□□□□ -1.71
FREM3P0C091 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FREM3P0C091 AC006466.1-201ENST00000438721 289 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 RN7SL244P-201ENST00000493405 297 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.39□□□□□ -1.71
FREM3P0C091 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.39□□□□□ -1.71
FREM3P0C091 BNIP3P1-201ENST00000547295 580 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 AC063949.1-201ENST00000552900 865 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
FREM3P0C091 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.39□□□□□ -1.71
FREM3P0C091 RN7SL802P-201ENST00000577858 299 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 MIR4277-201ENST00000578298 84 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FREM3P0C091 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.39□□□□□ -1.71
FREM3P0C091 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
FREM3P0C091 SOCS5P3-201ENST00000425115 1576 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 SCARNA15-201ENST00000607520 4325 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FREM3P0C091 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.39□□□□□ -1.71
FREM3P0C091 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.39□□□□□ -1.71
FREM3P0C091 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.39□□□□□ -1.71
FREM3P0C091 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FREM3P0C091 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
FREM3P0C091 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FREM3P0C091 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FREM3P0C091 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.39□□□□□ -1.71
FREM3P0C091 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FREM3P0C091 RN7SKP114-201ENST00000410327 279 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 AC005154.2-201ENST00000438110 379 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 AC020890.1-201ENST00000491837 504 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.39□□□□□ -1.71
FREM3P0C091 AL671862.1-201ENST00000515851 349 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.39□□□□□ -1.71
FREM3P0C091 AC133555.2-201ENST00000550213 292 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 AC093249.4-201ENST00000564755 259 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 UBE2FP2-201ENST00000566646 462 ntBASIC4.39□□□□□ -1.71
FREM3P0C091 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.39□□□□□ -1.71
FREM3P0C091 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.39□□□□□ -1.71
FREM3P0C091 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms