Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC017104.4-201ENST00000636283 1592 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC008549.2-201ENST00000333482 706 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 RNU1-150P-201ENST00000362491 162 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 OR7E101P-201ENST00000400428 513 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 MIR1282-201ENST00000408865 101 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 RNU2-22P-201ENST00000411266 212 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 EEF1B2P6-201ENST00000445713 673 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 GAPDHP25-201ENST00000447061 1001 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AL445665.1-202ENST00000452436 324 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 VDAC2P4-201ENST00000452925 711 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AL356390.1-201ENST00000455684 397 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 RPL23AP65-201ENST00000475608 468 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 RNU6-615P-201ENST00000516065 106 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 CYCSP22-201ENST00000517555 339 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AP004607.2-201ENST00000533949 322 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 CYCSP28-201ENST00000534284 321 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC008126.1-201ENST00000549019 480 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 IGBP1P1-201ENST00000554337 1009 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 GNG2-208ENST00000554875 430 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AP002884.5-201ENST00000595053 1132 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 GMCL1P2-201ENST00000605230 823 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 MIR6861-201ENST00000618657 64 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 EOGT-210ENST00000615922 1931 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 OR14L1P-202ENST00000641545 3009 ntBASIC3.77□□□□□ -1.81
HLA-DQA1P01909 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DQA1P01909 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 MRE11P1-201ENST00000464884 2127 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 LYPLA1P3-201ENST00000402650 695 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AL691447.1-201ENST00000419456 387 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 GSTM5P1-201ENST00000434751 660 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 TPTE2P1-204ENST00000435256 593 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC069285.2-201ENST00000440210 275 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 RPL36AP39-201ENST00000445859 318 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DQA1P01909 RPS23P6-201ENST00000466136 431 ntBASIC3.76□□□□□ -1.81
HLA-DQA1P01909 AC105918.1-201ENST00000474399 838 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms