Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC022133.1-201ENST00000490961 571 ntBASIC5.3□□□□□ -1.56
LDB2O43679 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.3□□□□□ -1.56
LDB2O43679 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.3□□□□□ -1.56
LDB2O43679 RNA5SP34-201ENST00000516887 130 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.3□□□□□ -1.56
LDB2O43679 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.3□□□□□ -1.56
LDB2O43679 AC093014.1-201ENST00000548926 724 ntBASIC5.3□□□□□ -1.56
LDB2O43679 NOP56P3-201ENST00000549457 385 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.3□□□□□ -1.56
LDB2O43679 NMNAT1P5-201ENST00000559657 841 ntBASIC5.3□□□□□ -1.56
LDB2O43679 MTCYBP13-201ENST00000578634 1093 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.3□□□□□ -1.56
LDB2O43679 MIR4443-201ENST00000585052 53 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.3□□□□□ -1.56
LDB2O43679 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.3□□□□□ -1.56
LDB2O43679 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.3□□□□□ -1.56
LDB2O43679 AC006116.5-201ENST00000591936 559 ntBASIC5.3□□□□□ -1.56
LDB2O43679 FKBP1AP1-201ENST00000594588 318 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AC068313.1-201ENST00000604028 1008 ntBASIC5.3□□□□□ -1.56
LDB2O43679 QTRT1P1-201ENST00000604344 1078 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AC011626.1-201ENST00000604710 562 ntBASIC5.3□□□□□ -1.56
LDB2O43679 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.3□□□□□ -1.56
LDB2O43679 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.3□□□□□ -1.56
LDB2O43679 AC136428.4-201ENST00000634254 1155 ntBASIC5.3□□□□□ -1.56
LDB2O43679 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.3□□□□□ -1.56
LDB2O43679 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LDB2O43679 SAMMSON-209ENST00000641222 1100 ntBASIC5.3□□□□□ -1.56
LDB2O43679 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LDB2O43679 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 TCP1P3-201ENST00000414406 1498 ntBASIC5.3□□□□□ -1.56
LDB2O43679 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.3□□□□□ -1.56
LDB2O43679 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LDB2O43679 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LDB2O43679 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LDB2O43679 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LDB2O43679 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LDB2O43679 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LDB2O43679 MTHFD2P5-201ENST00000320415 844 ntBASIC5.29□□□□□ -1.56
LDB2O43679 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.29□□□□□ -1.56
LDB2O43679 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.29□□□□□ -1.56
LDB2O43679 RN7SKP153-201ENST00000365026 316 ntBASIC5.29□□□□□ -1.56
LDB2O43679 MIR589-201ENST00000385238 99 ntBASIC5.29□□□□□ -1.56
LDB2O43679 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LDB2O43679 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.29□□□□□ -1.56
LDB2O43679 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.29□□□□□ -1.56
LDB2O43679 OR13Z1P-201ENST00000416141 834 ntBASIC5.29□□□□□ -1.56
LDB2O43679 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.29□□□□□ -1.56
LDB2O43679 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.29□□□□□ -1.56
LDB2O43679 AC007563.3-201ENST00000433233 371 ntBASIC5.29□□□□□ -1.56
LDB2O43679 AL512661.1-201ENST00000434586 1253 ntBASIC5.29□□□□□ -1.56
LDB2O43679 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.29□□□□□ -1.56
LDB2O43679 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.29□□□□□ -1.56
LDB2O43679 AC098826.2-201ENST00000452011 651 ntBASIC5.29□□□□□ -1.56
LDB2O43679 RPL32P14-201ENST00000463196 378 ntBASIC5.29□□□□□ -1.56
LDB2O43679 HMGB1P3-201ENST00000502802 616 ntBASIC5.29□□□□□ -1.56
LDB2O43679 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.29□□□□□ -1.56
LDB2O43679 EIF3KP3-201ENST00000514461 639 ntBASIC5.29□□□□□ -1.56
LDB2O43679 MTND1P24-201ENST00000552175 861 ntBASIC5.29□□□□□ -1.56
LDB2O43679 AC084759.1-201ENST00000561168 290 ntBASIC5.29□□□□□ -1.56
LDB2O43679 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.29□□□□□ -1.56
LDB2O43679 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.29□□□□□ -1.56
LDB2O43679 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LDB2O43679 OR7E18P-201ENST00000592589 702 ntBASIC5.29□□□□□ -1.56
LDB2O43679 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.29□□□□□ -1.56
LDB2O43679 AC091057.3-201ENST00000602684 733 ntBASIC5.29□□□□□ -1.56
LDB2O43679 AC008814.1-201ENST00000603797 406 ntBASIC5.29□□□□□ -1.56
LDB2O43679 AC009597.2-201ENST00000604659 592 ntBASIC5.29□□□□□ -1.56
LDB2O43679 AC013244.3-201ENST00000605614 388 ntBASIC5.29□□□□□ -1.56
LDB2O43679 RNU6-84P-201ENST00000607737 102 ntBASIC5.29□□□□□ -1.56
LDB2O43679 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.29□□□□□ -1.56
LDB2O43679 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.29□□□□□ -1.56
LDB2O43679 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LDB2O43679 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.29□□□□□ -1.56
LDB2O43679 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.29□□□□□ -1.56
LDB2O43679 AC073342.3-201ENST00000624211 193 ntBASIC5.29□□□□□ -1.56
LDB2O43679 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.29□□□□□ -1.56
LDB2O43679 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
LDB2O43679 AL121839.2-201ENST00000565058 6943 ntBASIC5.29□□□□□ -1.56
LDB2O43679 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LDB2O43679 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
LDB2O43679 AC023421.1-201ENST00000590535 1785 ntBASIC5.29□□□□□ -1.56
LDB2O43679 AC106754.1-201ENST00000562632 1513 ntBASIC5.28□□□□□ -1.56
LDB2O43679 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDB2O43679 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.28□□□□□ -1.56
LDB2O43679 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
LDB2O43679 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LDB2O43679 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.28□□□□□ -1.56
LDB2O43679 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LDB2O43679 RNU1-149P-201ENST00000390870 161 ntBASIC5.28□□□□□ -1.56
LDB2O43679 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.28□□□□□ -1.56
LDB2O43679 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.28□□□□□ -1.56
LDB2O43679 RN7SKP199-201ENST00000410325 305 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AC106883.1-201ENST00000418805 562 ntBASIC5.28□□□□□ -1.56
LDB2O43679 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms