Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 VN1R110P-201ENST00000438988 971 ntBASIC5.59□□□□□ -1.51
PROM1O43490 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.59□□□□□ -1.51
PROM1O43490 XKRYP5-201ENST00000449659 483 ntBASIC5.59□□□□□ -1.51
PROM1O43490 CYCSP42-201ENST00000450823 238 ntBASIC5.59□□□□□ -1.51
PROM1O43490 OSTCP1-201ENST00000455507 450 ntBASIC5.59□□□□□ -1.51
PROM1O43490 CST12P-201ENST00000457644 362 ntBASIC5.59□□□□□ -1.51
PROM1O43490 AC092691.2-201ENST00000461787 803 ntBASIC5.59□□□□□ -1.51
PROM1O43490 RPSAP39-201ENST00000467439 883 ntBASIC5.59□□□□□ -1.51
PROM1O43490 AL157777.1-201ENST00000468100 304 ntBASIC5.59□□□□□ -1.51
PROM1O43490 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 PSMA2P2-201ENST00000504319 686 ntBASIC5.59□□□□□ -1.51
PROM1O43490 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.59□□□□□ -1.51
PROM1O43490 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.59□□□□□ -1.51
PROM1O43490 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.59□□□□□ -1.51
PROM1O43490 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.59□□□□□ -1.51
PROM1O43490 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.59□□□□□ -1.51
PROM1O43490 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.59□□□□□ -1.51
PROM1O43490 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.59□□□□□ -1.51
PROM1O43490 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.59□□□□□ -1.51
PROM1O43490 AC079905.1-201ENST00000549280 475 ntBASIC5.59□□□□□ -1.51
PROM1O43490 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.59□□□□□ -1.51
PROM1O43490 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.59□□□□□ -1.51
PROM1O43490 AC016180.1-201ENST00000567945 403 ntBASIC5.59□□□□□ -1.51
PROM1O43490 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.59□□□□□ -1.51
PROM1O43490 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.59□□□□□ -1.51
PROM1O43490 AC068790.2-201ENST00000602601 557 ntBASIC5.59□□□□□ -1.51
PROM1O43490 AL158042.1-201ENST00000605338 460 ntBASIC5.59□□□□□ -1.51
PROM1O43490 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.59□□□□□ -1.51
PROM1O43490 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.59□□□□□ -1.51
PROM1O43490 AL139407.1-201ENST00000613826 1175 ntBASIC5.59□□□□□ -1.51
PROM1O43490 AC024884.1-201ENST00000620583 399 ntBASIC5.59□□□□□ -1.51
PROM1O43490 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.59□□□□□ -1.51
PROM1O43490 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.59□□□□□ -1.51
PROM1O43490 SNORA17.5-201ENST00000630429 132 ntBASIC5.59□□□□□ -1.51
PROM1O43490 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
PROM1O43490 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PROM1O43490 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.59□□□□□ -1.52
PROM1O43490 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.59□□□□□ -1.52
PROM1O43490 AF287957.1-201ENST00000607368 1595 ntBASIC5.59□□□□□ -1.52
PROM1O43490 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
PROM1O43490 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 AC007382.1-201ENST00000624376 2618 ntBASIC5.58□□□□□ -1.52
PROM1O43490 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 RNU6-1214P-201ENST00000363650 109 ntBASIC5.58□□□□□ -1.52
PROM1O43490 RN7SKP128-201ENST00000364270 303 ntBASIC5.58□□□□□ -1.52
PROM1O43490 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 AC104297.1-201ENST00000393779 870 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AC016739.1-201ENST00000405359 345 ntBASIC5.58□□□□□ -1.52
PROM1O43490 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.58□□□□□ -1.52
PROM1O43490 MTND4P3-201ENST00000417829 541 ntBASIC5.58□□□□□ -1.52
PROM1O43490 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PROM1O43490 USP24P1-201ENST00000433802 779 ntBASIC5.58□□□□□ -1.52
PROM1O43490 USP9YP28-201ENST00000435142 589 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 ATP5C1P1-201ENST00000441945 895 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AL353898.1-201ENST00000444055 238 ntBASIC5.58□□□□□ -1.52
PROM1O43490 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 ATG12P2-201ENST00000456830 416 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.58□□□□□ -1.52
PROM1O43490 TPTE2P5-203ENST00000458118 728 ntBASIC5.58□□□□□ -1.52
PROM1O43490 RPL38P3-201ENST00000484463 213 ntBASIC5.58□□□□□ -1.52
PROM1O43490 PPIAP19-201ENST00000486414 492 ntBASIC5.58□□□□□ -1.52
PROM1O43490 RN7SL193P-201ENST00000491708 276 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.58□□□□□ -1.52
PROM1O43490 AC091951.3-201ENST00000504093 246 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.58□□□□□ -1.52
PROM1O43490 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.58□□□□□ -1.52
PROM1O43490 snoU109.5-201ENST00000516231 132 ntBASIC5.58□□□□□ -1.52
PROM1O43490 MIR2117-201ENST00000516780 80 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.58□□□□□ -1.52
PROM1O43490 AC087373.1-201ENST00000524920 491 ntBASIC5.58□□□□□ -1.52
PROM1O43490 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.58□□□□□ -1.52
PROM1O43490 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.58□□□□□ -1.52
PROM1O43490 DUXAP6-201ENST00000553858 601 ntBASIC5.58□□□□□ -1.52
PROM1O43490 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.58□□□□□ -1.52
PROM1O43490 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.58□□□□□ -1.52
PROM1O43490 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms