Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.05□□□□□ -1.6
NDUFS4O43181 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.05□□□□□ -1.6
NDUFS4O43181 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NDUFS4O43181 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.05□□□□□ -1.6
NDUFS4O43181 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.05□□□□□ -1.6
NDUFS4O43181 TCP1P3-201ENST00000414406 1498 ntBASIC5.05□□□□□ -1.6
NDUFS4O43181 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NDUFS4O43181 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.05□□□□□ -1.6
NDUFS4O43181 AL031595.2-201ENST00000624215 19071 ntBASIC5.05□□□□□ -1.6
NDUFS4O43181 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.05□□□□□ -1.6
NDUFS4O43181 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
NDUFS4O43181 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NDUFS4O43181 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NDUFS4O43181 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.04□□□□□ -1.6
NDUFS4O43181 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NDUFS4O43181 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NDUFS4O43181 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 AC097063.1-201ENST00000426714 1797 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AC023421.1-201ENST00000590535 1785 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 NLRP3P1-201ENST00000622303 1785 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NDUFS4O43181 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
NDUFS4O43181 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NDUFS4O43181 RNU1-146P-201ENST00000364015 165 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 SNORA5.1-201ENST00000384275 131 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 TAF9BP2-201ENST00000400856 499 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 MIR1286-201ENST00000408112 78 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.04□□□□□ -1.6
NDUFS4O43181 SLC35E1P1-201ENST00000419313 864 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AC093655.2-201ENST00000425735 631 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 UBE2D3P3-201ENST00000426992 425 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 RPL23AP4-201ENST00000427757 463 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.04□□□□□ -1.6
NDUFS4O43181 NOP56P2-201ENST00000447491 769 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 COPS8P2-201ENST00000473228 627 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
NDUFS4O43181 RPL7P6-201ENST00000480903 738 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 RN7SL205P-201ENST00000490174 284 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.04□□□□□ -1.6
NDUFS4O43181 MTCO2P9-201ENST00000503214 694 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.04□□□□□ -1.6
NDUFS4O43181 AC024558.1-201ENST00000505008 528 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 PGAM1P13-201ENST00000507497 754 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 RNA5SP373-201ENST00000517271 95 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 AC018442.3-201ENST00000523025 183 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NDUFS4O43181 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.04□□□□□ -1.6
NDUFS4O43181 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.04□□□□□ -1.6
NDUFS4O43181 MIR4675-201ENST00000577898 77 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.04□□□□□ -1.6
NDUFS4O43181 AC009597.2-201ENST00000604659 592 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AL512329.2-201ENST00000607350 548 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 MIR6839-201ENST00000620425 113 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AC095038.2-201ENST00000621464 1070 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AC006840.1-201ENST00000623069 542 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.04□□□□□ -1.6
NDUFS4O43181 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.04□□□□□ -1.6
NDUFS4O43181 FRG1DP-201ENST00000635586 771 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NDUFS4O43181 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NDUFS4O43181 AC092747.4-201ENST00000620519 1861 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 SPATA2P1-201ENST00000431223 2055 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.04□□□□□ -1.6
NDUFS4O43181 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.04□□□□□ -1.6
NDUFS4O43181 AC011493.1-201ENST00000596753 1632 ntBASIC5.04□□□□□ -1.6
NDUFS4O43181 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.04□□□□□ -1.6
NDUFS4O43181 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NDUFS4O43181 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.03□□□□□ -1.6
NDUFS4O43181 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NDUFS4O43181 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NDUFS4O43181 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.03□□□□□ -1.6
NDUFS4O43181 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NDUFS4O43181 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NDUFS4O43181 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NDUFS4O43181 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NDUFS4O43181 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NDUFS4O43181 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NDUFS4O43181 SNORA63.3-201ENST00000362682 132 ntBASIC5.03□□□□□ -1.6
NDUFS4O43181 MIR589-201ENST00000385238 99 ntBASIC5.03□□□□□ -1.6
NDUFS4O43181 MIR323B-201ENST00000385269 82 ntBASIC5.03□□□□□ -1.6
NDUFS4O43181 ATP5F1P6-201ENST00000402768 767 ntBASIC5.03□□□□□ -1.6
NDUFS4O43181 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.03□□□□□ -1.6
NDUFS4O43181 HYALP1-201ENST00000417674 1279 ntBASIC5.03□□□□□ -1.6
NDUFS4O43181 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.03□□□□□ -1.6
NDUFS4O43181 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NDUFS4O43181 CLUHP1-201ENST00000435012 1190 ntBASIC5.03□□□□□ -1.6
NDUFS4O43181 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.03□□□□□ -1.6
NDUFS4O43181 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.03□□□□□ -1.6
NDUFS4O43181 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms