Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.63□□□□□ -1.67
UPK1AO00322 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1AO00322 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1AO00322 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
UPK1AO00322 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UPK1AO00322 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1AO00322 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
UPK1AO00322 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
UPK1AO00322 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
UPK1AO00322 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1AO00322 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
UPK1AO00322 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.62□□□□□ -1.67
UPK1AO00322 GJA6P-201ENST00000415117 1042 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 AF186996.5-201ENST00000418098 904 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.62□□□□□ -1.67
UPK1AO00322 BX510359.3-201ENST00000422168 306 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 RPS26P2-201ENST00000440331 348 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
UPK1AO00322 OR2A3P-201ENST00000493774 953 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 AC093763.2-201ENST00000505334 1223 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 OR10G5P-201ENST00000532733 358 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1AO00322 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.62□□□□□ -1.67
UPK1AO00322 MEMO1P5-201ENST00000604810 406 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 AL353600.1-201ENST00000608148 251 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 AC005086.4-201ENST00000623065 213 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1AO00322 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1AO00322 AC108751.5-201ENST00000492880 1336 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 DDX18P5-201ENST00000534547 1306 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.62□□□□□ -1.67
UPK1AO00322 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.62□□□□□ -1.67
UPK1AO00322 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1AO00322 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
UPK1AO00322 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.62□□□□□ -1.67
UPK1AO00322 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1AO00322 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
UPK1AO00322 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1AO00322 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
UPK1AO00322 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1AO00322 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
UPK1AO00322 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1AO00322 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
UPK1AO00322 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1AO00322 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1AO00322 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.61□□□□□ -1.67
UPK1AO00322 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.61□□□□□ -1.67
UPK1AO00322 CR788268.1-201ENST00000603931 1809 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1AO00322 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1AO00322 Z97832.1-201ENST00000402490 328 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 MIR1178-201ENST00000408396 91 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 U3.35-201ENST00000408405 208 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 OR6C64P-201ENST00000419708 825 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1AO00322 RPS27P18-201ENST00000431701 247 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 AL137845.2-201ENST00000444292 988 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 Z80107.2-201ENST00000445127 392 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1AO00322 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1AO00322 RN7SL319P-201ENST00000480656 221 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1AO00322 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1AO00322 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1AO00322 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.61□□□□□ -1.67
UPK1AO00322 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 IGLV2-28-201ENST00000520681 304 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 AC013701.1-201ENST00000522657 465 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.61□□□□□ -1.67
UPK1AO00322 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.61□□□□□ -1.67
UPK1AO00322 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1AO00322 TVP23CP2-201ENST00000571473 623 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1AO00322 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.61□□□□□ -1.67
UPK1AO00322 AC087783.2-201ENST00000605070 562 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 AC091979.2-201ENST00000607514 214 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 OR7M1P-201ENST00000608946 533 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 uc_338.18-201ENST00000615451 175 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
UPK1AO00322 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.61□□□□□ -1.67
UPK1AO00322 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1AO00322 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1AO00322 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1AO00322 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
UPK1AO00322 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.61□□□□□ -1.67
UPK1AO00322 SOCS5P3-201ENST00000425115 1576 ntBASIC4.61□□□□□ -1.67
UPK1AO00322 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1AO00322 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
UPK1AO00322 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.6□□□□□ -1.67
UPK1AO00322 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.6□□□□□ -1.67
UPK1AO00322 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.6□□□□□ -1.67
UPK1AO00322 AC007342.5-201ENST00000571340 2142 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
UPK1AO00322 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
UPK1AO00322 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 RNA5SP296-201ENST00000410523 111 ntBASIC4.6□□□□□ -1.67
UPK1AO00322 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.6□□□□□ -1.67
UPK1AO00322 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.6□□□□□ -1.67
UPK1AO00322 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms