Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 GLUD1P9-201ENST00000420997 1173 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AL590762.4-201ENST00000425885 253 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC090018.1-201ENST00000434369 367 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 TMX2P1-201ENST00000436507 708 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 MED28P3-201ENST00000444288 531 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC104634.1-201ENST00000452720 462 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AP000797.2-201ENST00000475768 606 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 COX6B1P2-201ENST00000489624 230 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC231760.1-201ENST00000498002 260 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 MIR4646-201ENST00000580775 63 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC010632.3-201ENST00000611377 369 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC244107.2-201ENST00000611773 76 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC020658.4-201ENST00000613987 684 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AP002799.1-201ENST00000623552 423 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.8□□□□□ -1.64
NPIPA2E9PIF3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 ADAM24P-201ENST00000398655 2101 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 CASC19-221ENST00000641309 1382 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 CASC19-281ENST00000642118 1554 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AP000542.2-201ENST00000623199 6179 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 MIR550A3-201ENST00000390735 95 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 DBIP1-201ENST00000401435 260 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AL139039.2-201ENST00000407436 479 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 NPM1P26-201ENST00000426339 738 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AL772161.1-201ENST00000439130 476 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 RPL7P61-201ENST00000451721 751 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 Z92846.1-201ENST00000456203 268 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 EIF3KP3-201ENST00000514461 639 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 RNA5SP373-201ENST00000517271 95 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC024940.3-201ENST00000538551 316 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 OR11H3P-201ENST00000554547 982 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 CD24P2-201ENST00000565486 219 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC009237.13-201ENST00000603193 276 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC108738.1-201ENST00000603703 237 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC005252.1-201ENST00000604518 1063 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 Mico1.1-201ENST00000611698 204 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC090527.3-201ENST00000619041 548 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AL133370.2-201ENST00000619934 439 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 AC135068.5-201ENST00000624197 983 ntBASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPIPA2E9PIF3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms