Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.68□□□□□ -1.66
TRBV4-1A0A0J9YWV2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNA5SP510-201ENST00000364697 99 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RN7SKP124-201ENST00000364730 341 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SNORA2.3-201ENST00000383920 135 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL391422.1-201ENST00000402155 436 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL390774.1-201ENST00000411924 246 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC234781.4-201ENST00000419384 244 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 GAPDHP34-201ENST00000432112 823 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SUMO2P1-206ENST00000445436 284 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RPL7P45-201ENST00000455851 743 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC093166.2-201ENST00000455969 1017 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC084754.1-201ENST00000463466 464 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNA5SP303-201ENST00000516192 130 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC103833.1-201ENST00000517442 172 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RPL23AP53-201ENST00000521854 457 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC005868.1-201ENST00000536421 331 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 NDUFB4P11-201ENST00000560510 395 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC020978.7-201ENST00000575953 1187 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SNORD39.2-201ENST00000579995 76 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RN7SL435P-201ENST00000584418 282 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SUGT1P3-202ENST00000604259 383 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC135178.6-201ENST00000605314 398 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC253576.2-201ENST00000618815 580 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC105105.5-201ENST00000622635 1294 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL731566.1-201ENST00000620490 1937 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 KARSP1-201ENST00000451871 1752 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC008079.2-201ENST00000623543 20396 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC235565.1-201ENST00000456962 1325 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 MRRFP1-201ENST00000435941 1675 ntBASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRBV4-1A0A0J9YWV2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL603750.1-201ENST00000624216 1717 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SPATA2P1-201ENST00000431223 2055 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL353692.2-201ENST00000407054 335 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SDHDP6-201ENST00000414693 480 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL133325.1-201ENST00000421090 382 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RPS4XP16-201ENST00000427198 791 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CYCSP6-201ENST00000434498 302 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RPL23AP19-201ENST00000436229 369 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RPL12P18-201ENST00000437175 325 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL513321.1-201ENST00000441175 761 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AP000281.1-201ENST00000444036 316 ntBASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.66□□□□□ -1.66
TRBV4-1A0A0J9YWV2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms