Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 AL359091.2-201ENST00000609303 556 ntBASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 MIR6723-201ENST00000621981 89 ntBASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 AC025262.3-201ENST00000623666 360 ntBASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 AL109653.2-201ENST00000625029 1065 ntBASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 AC244205.2-202ENST00000635781 342 ntBASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 NXF4-202ENST00000416098 1465 ntBASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC2.45□□□□□ -2.02
LINC01558Q9Y6Z2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 TUBBP10-201ENST00000427668 1301 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AL445437.1-201ENST00000623157 3087 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 OR11H4-201ENST00000315409 1082 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RNU1-134P-201ENST00000362935 165 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RNU6-146P-201ENST00000384602 108 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RNU1-56P-201ENST00000391303 164 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RN7SKP91-201ENST00000410852 288 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RN7SKP167-201ENST00000411047 285 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 DUTP8-201ENST00000418412 489 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RPL21P91-201ENST00000429231 479 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 OR2L9P-201ENST00000444456 913 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RPL6P24-201ENST00000445338 864 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RNU6-941P-201ENST00000516346 108 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 IGKV2-23-201ENST00000518729 323 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 OR5D15P-201ENST00000531671 942 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 CCDC58P5-201ENST00000536923 432 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 MED31-202ENST00000574128 619 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC091178.1-203ENST00000584586 279 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC008521.2-201ENST00000591021 259 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC011465.1-201ENST00000599092 328 ntTSL 3 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC01558Q9Y6Z2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms