Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC023421.1-201ENST00000590535 1785 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 RNU6-386P-201ENST00000362650 107 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 RNU1-106P-201ENST00000384382 164 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 SNORA70-201ENST00000384436 135 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 MIR765-201ENST00000390226 114 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 NUDT19P3-201ENST00000404698 555 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AL358178.1-201ENST00000407698 397 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 MIR1182-201ENST00000408363 97 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 RPL12P43-201ENST00000420608 499 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 RAB9AP5-201ENST00000437794 597 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 RAB9AP2-201ENST00000443911 597 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC090804.1-201ENST00000448870 490 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AL353718.1-201ENST00000451028 517 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 RPS4XP12-201ENST00000461747 709 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 BX284632.1-201ENST00000478218 541 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 RPSAP50-201ENST00000481955 852 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC008628.1-201ENST00000508663 265 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 DUX4L52-201ENST00000549363 777 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC044860.2-201ENST00000561005 179 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 FAM60CP-201ENST00000591086 664 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 OR7M1P-201ENST00000608946 533 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 SMG1P7-201ENST00000565246 2704 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 AC104260.2-201ENST00000623551 3497 ntBASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX9Q9Y5X1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 RN7SKP74-201ENST00000362849 309 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 RNU6-729P-201ENST00000384399 107 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AL589655.1-201ENST00000405398 482 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 RN7SKP213-201ENST00000410746 298 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AJ239321.1-201ENST00000424255 564 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AL445528.1-201ENST00000426330 420 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AL136231.1-201ENST00000429407 730 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 MRPS33P4-201ENST00000434892 317 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AL138787.1-202ENST00000437804 898 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AL691517.1-201ENST00000440833 1235 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 VN1R48P-201ENST00000448149 1036 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 MTND5P8-201ENST00000449817 1083 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC092647.2-201ENST00000452998 253 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC147055.3-201ENST00000510547 851 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 RN7SKP34-201ENST00000516142 244 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC092709.1-201ENST00000521355 1045 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AP003049.1-201ENST00000529418 457 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 HMGN2P6-201ENST00000551091 273 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 LINC00557-201ENST00000563184 1279 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC007448.1-201ENST00000582714 234 ntBASIC5.57□□□□□ -1.52
SNX9Q9Y5X1 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms