Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC019185.1-201ENST00000442718 389 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 RPL7P61-201ENST00000451721 751 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 RN7SL727P-201ENST00000482164 296 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC093534.1-201ENST00000504977 132 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 HIGD1AP14-201ENST00000507617 282 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 OR8Q1P-201ENST00000526467 655 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 DHFRP1-201ENST00000579682 559 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 MIR4311-201ENST00000580794 100 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 EIF1P5-201ENST00000585002 234 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC008507.2-201ENST00000588402 1176 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC012213.4-201ENST00000606457 354 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC112503.1-201ENST00000608436 391 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC124016.2-201ENST00000610058 665 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC136428.4-201ENST00000634254 1155 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 CPS1-IT1-201ENST00000628368 2306 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 CR382285.2-201ENST00000624662 1495 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC109780.1-201ENST00000451768 1344 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AL603750.1-201ENST00000624216 1717 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC005294.1-201ENST00000355509 281 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 RNA5SP183-201ENST00000362452 119 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 SNORA5.1-201ENST00000384275 131 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC002524.1-201ENST00000411687 547 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 RPS6P23-201ENST00000413224 722 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 CBX1P3-201ENST00000413296 527 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AL158050.1-201ENST00000416077 457 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC007394.1-201ENST00000421941 531 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AL139148.1-201ENST00000427122 680 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 CNOT7P2-201ENST00000441051 832 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 MTND2P8-201ENST00000450555 1025 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 VDAC2P4-201ENST00000452925 711 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC004129.2-201ENST00000457229 287 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC008379.1-201ENST00000463655 464 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC079841.1-201ENST00000481228 950 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 PRELID3BP5-201ENST00000508612 460 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 RN7SKP265-201ENST00000516448 223 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 OR4A43P-201ENST00000532938 908 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC244502.2-201ENST00000543361 851 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AGGF1P7-201ENST00000562369 913 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 MTCO2P2-201ENST00000591258 225 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 BNIP3P32-201ENST00000600015 554 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 MTCO3P22-201ENST00000603219 784 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC097065.2-201ENST00000608159 533 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AC090617.9-201ENST00000623751 147 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 HSPA8P14-201ENST00000552265 1805 ntBASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX2IPQ9Y2D8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 NAMPTP1-201ENST00000440465 2514 ntBASIC5.98□□□□□ -1.45
SSX2IPQ9Y2D8 AL360270.2-201ENST00000562952 5985 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms