Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 AL157770.1-201ENST00000623049 439 ntBASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PPARGC1AQ9UBK2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC093297.3-201ENST00000607056 2517 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC015799.1-201ENST00000622996 3122 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC104966.1-201ENST00000467010 1464 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 RNU105B-201ENST00000364478 208 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL021407.1-201ENST00000404531 386 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 RNA5SP431-201ENST00000410312 120 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 RPS7P8-201ENST00000418311 581 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 HSPE1P16-201ENST00000426640 348 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 PNKDP1-201ENST00000435914 430 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC093716.1-201ENST00000435923 377 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 ELOCP8-201ENST00000439309 332 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 ELOCP15-201ENST00000442090 332 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 TRIM60P16-201ENST00000444048 694 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL512593.1-201ENST00000444758 779 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 RPL12P26-201ENST00000452430 487 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 USP9YP10-201ENST00000454868 628 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL109741.2-201ENST00000455561 343 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC009963.3-201ENST00000458090 486 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC011979.1-201ENST00000472300 483 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 USP9YP5-201ENST00000511770 630 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 PRMT5P1-201ENST00000514351 598 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL391156.1-201ENST00000554965 554 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 SNORD39.2-201ENST00000579995 76 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 FAM106CP-201ENST00000582212 507 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 MIR4271-201ENST00000582451 67 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 GLYATL1P2-202ENST00000588046 902 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL031281.1-201ENST00000604049 488 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AP001437.1-201ENST00000608783 456 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC245297.2-201ENST00000610119 565 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 RN7SL261P-201ENST00000613441 282 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 RFPL4AP6-201ENST00000616792 846 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC006338.2-201ENST00000616864 791 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL512652.1-201ENST00000619006 500 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC091931.1-201ENST00000623488 728 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC073593.1-201ENST00000624500 411 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL392088.2-201ENST00000637607 285 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AL390237.1-201ENST00000404226 1415 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 AC000367.1-201ENST00000452711 1766 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 ECM1P2-201ENST00000503354 1577 ntBASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PPARGC1AQ9UBK2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PPARGC1AQ9UBK2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms