Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC090022.1-201ENST00000546569 311 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC087477.6-201ENST00000559595 843 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 NDUFA5P11-201ENST00000567995 343 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC095055.1-201ENST00000603472 1113 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 TAS2R6P-201ENST00000605022 826 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC087783.2-201ENST00000605070 562 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC087821.1-201ENST00000623639 567 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 HSPA8P18-201ENST00000439846 1928 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 AC107068.1-201ENST00000563286 4218 ntBASIC4.65□□□□□ -1.67
VAPAQ9P0L0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VAPAQ9P0L0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 DUTP5-201ENST00000406790 469 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 RN7SKP59-201ENST00000410520 314 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 RN7SKP126-201ENST00000411143 300 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 MRPL48P1-201ENST00000445390 636 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 RBMY2TP-201ENST00000451162 947 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 RPS6P2-201ENST00000454208 705 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 RN7SL717P-201ENST00000478343 297 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 RPL7AP10-201ENST00000481016 791 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 RPS4XP1-201ENST00000482189 787 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC016687.1-201ENST00000482574 353 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 MTATP6P1-201ENST00000514057 681 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 RNA5SP464-201ENST00000516251 108 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 EIF1P5-201ENST00000585002 234 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 FKBP1AP1-201ENST00000594588 318 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC005377.1-201ENST00000605126 456 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AL159169.2-201ENST00000610061 1269 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC079395.2-201ENST00000610982 737 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC004477.3-201ENST00000614061 590 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AP001005.3-201ENST00000622049 129 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 AC006840.1-201ENST00000623069 542 ntBASIC4.64□□□□□ -1.67
VAPAQ9P0L0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VAPAQ9P0L0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 RNU1-83P-201ENST00000363426 164 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 RNA5SP178-201ENST00000410380 128 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 E2F6P2-201ENST00000420708 748 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 OR52B5P-201ENST00000435337 951 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 RPL34P20-201ENST00000442771 351 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 OR7E125P-201ENST00000443450 846 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 RPS21P4-201ENST00000487122 248 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AC108693.1-201ENST00000496068 432 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 RNA5SP362-201ENST00000516048 118 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AL049779.2-201ENST00000553847 315 ntBASIC4.63□□□□□ -1.67
VAPAQ9P0L0 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VAPAQ9P0L0 MIR6837-201ENST00000620884 64 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms