Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 RNA5SP439-201ENST00000617595 124 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL603755.1-201ENST00000619504 163 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 MIR7854-201ENST00000620068 65 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL122023.1-201ENST00000622847 530 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AP005901.5-201ENST00000545779 1796 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCM2LQ9NUG4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
CCM2LQ9NUG4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCM2LQ9NUG4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.84□□□□□ -1.48
CCM2LQ9NUG4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC046144.1-201ENST00000478559 1853 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC106872.5-201ENST00000508856 1416 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AL513185.3-201ENST00000433335 1300 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RNA5SP453-201ENST00000362503 119 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 U3.10-201ENST00000364459 214 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RN7SKP281-201ENST00000410472 352 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RPL7P53-201ENST00000421245 739 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RPS29P14-201ENST00000431518 171 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 GTF2IP7-202ENST00000436677 309 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AL035551.1-201ENST00000446931 348 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AL133477.1-201ENST00000457472 514 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RN7SL552P-201ENST00000462094 276 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC090114.3-201ENST00000479267 829 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC104971.1-201ENST00000495117 578 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC002456.2-201ENST00000509356 380 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC093755.1-201ENST00000512950 1023 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC097486.1-201ENST00000515331 210 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 snoU109.5-201ENST00000516231 132 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC092747.2-201ENST00000545069 983 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 LINC00556-201ENST00000569603 412 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AL589765.6-201ENST00000601909 549 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AL158042.1-201ENST00000605338 460 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AL450489.1-201ENST00000612071 468 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 MIR7159-201ENST00000620587 66 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC067852.7-201ENST00000623270 535 ntBASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.83□□□□□ -1.48
CCM2LQ9NUG4 AC093225.1-201ENST00000506867 1408 ntBASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 MFSD8-219ENST00000641228 2559 ntBASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCM2LQ9NUG4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms