Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 RNU4-21P-201ENST00000362802 126 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 SNORD16-201ENST00000362803 99 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 RNA5SP77-201ENST00000365394 120 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC003045.1-201ENST00000398779 713 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC136624.1-201ENST00000400791 413 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 VIM2P-201ENST00000402383 1294 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 U3.43-201ENST00000410734 213 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC007899.1-201ENST00000412776 775 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 UBE2V1P14-201ENST00000415815 558 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC007568.1-201ENST00000422912 471 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AL022400.1-201ENST00000423946 935 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 MGAT2P2-201ENST00000427194 797 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AL590103.1-201ENST00000434488 307 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 SUMO2P8-201ENST00000434672 286 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 VN1R54P-201ENST00000435210 1049 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 USP9YP22-201ENST00000438971 294 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 RN7SL39P-201ENST00000462264 297 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 RPL5P13-201ENST00000462840 709 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 RN7SL165P-201ENST00000477476 291 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC098818.1-201ENST00000478593 252 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 RNU6-405P-201ENST00000516637 110 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 RNU6-678P-201ENST00000516832 109 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC007954.1-201ENST00000554198 494 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 SLC25A36P1-201ENST00000590111 465 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC007684.1-201ENST00000609671 477 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 MIR6780B-201ENST00000610307 79 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC022509.4-201ENST00000621404 572 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 LINC01808-202ENST00000641680 1116 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC011455.2-201ENST00000599320 3336 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AL449283.1-201ENST00000602631 3403 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC092447.7-201ENST00000422212 1621 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 VN2R3P-201ENST00000422626 1412 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 SNORD8-201ENST00000363915 110 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 RN7SKP171-201ENST00000364417 303 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AL121977.1-201ENST00000401636 979 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 TPMTP3-201ENST00000411928 735 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 PAICSP7-201ENST00000419829 962 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 RPS27AP7-201ENST00000422792 455 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 IPMKP1-201ENST00000425988 855 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 MED14P1-201ENST00000430517 648 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 MTND1P30-201ENST00000441241 901 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms