Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RN7SL502P-201ENST00000481857 290 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 RPL21P47-201ENST00000483696 477 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS11Q9H270 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS11Q9H270 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 RNU6-1129P-201ENST00000515964 104 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 RNA5SP96-201ENST00000516041 107 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 RN7SKP288-201ENST00000516227 268 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 RNU6-1004P-201ENST00000516584 111 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.02□□□□□ -1.45
VPS11Q9H270 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS11Q9H270 MTCO1P49-201ENST00000523429 802 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS11Q9H270 MTND4P33-201ENST00000556706 766 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AL133241.1-201ENST00000556832 487 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 ZNF322P1-201ENST00000568013 1209 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS11Q9H270 MIR744-201ENST00000578242 98 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AC119403.2-201ENST00000590960 598 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC078795.2-201ENST00000602835 1252 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 LARP7P1-201ENST00000605576 316 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 uc_338.26-201ENST00000612659 160 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AC073968.1-201ENST00000618594 637 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC145207.9-201ENST00000623802 325 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC091965.5-201ENST00000624785 342 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.02□□□□□ -1.45
VPS11Q9H270 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AC114774.1-201ENST00000507410 1770 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VPS11Q9H270 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 NXF4-202ENST00000416098 1465 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AC130304.1-201ENST00000622942 2385 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 AC123769.1-201ENST00000530992 3192 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
VPS11Q9H270 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 RNA5SP77-201ENST00000365394 120 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VPS11Q9H270 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VPS11Q9H270 ARSFP1-201ENST00000398758 477 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 AL096711.1-201ENST00000404780 554 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AC010385.1-201ENST00000412374 256 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS11Q9H270 OSTCP5-201ENST00000425293 453 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 MTND4P28-201ENST00000426217 387 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VPS11Q9H270 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AC128677.1-201ENST00000436016 442 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 OR3D1P-201ENST00000438288 955 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AL031681.1-201ENST00000443304 400 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 WDR82P2-201ENST00000444540 928 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 AL512593.1-201ENST00000444758 779 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AL671855.1-201ENST00000446875 1203 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS11Q9H270 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS11Q9H270 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS11Q9H270 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.01□□□□□ -1.45
VPS11Q9H270 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.01□□□□□ -1.45
VPS11Q9H270 AC008565.1-201ENST00000509046 885 ntBASIC6.01□□□□□ -1.45
VPS11Q9H270 HPRT1P1-201ENST00000509498 657 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms