Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC044860.2-201ENST00000561005 179 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC005377.1-201ENST00000605126 456 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC138965.3-201ENST00000623875 498 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC003985.2-201ENST00000562268 1669 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AL136116.2-201ENST00000404020 785 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 OR5M12P-201ENST00000423388 929 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AC093166.2-201ENST00000455969 1017 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AC026688.1-201ENST00000520639 1168 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AC005868.1-201ENST00000536421 331 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 LSM3P2-201ENST00000551246 273 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AL049830.4-201ENST00000555149 351 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 MIR4691-201ENST00000583764 85 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AC009163.6-201ENST00000612367 342 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 AL049794.2-201ENST00000616301 365 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 SCARNA15-201ENST00000607520 4325 ntBASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.59□□□□□ -1.51
CCSER1Q9C0I3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 HSPA8P18-201ENST00000439846 1928 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 RNA5SP428-201ENST00000365129 132 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AL078599.1-201ENST00000402075 293 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 TMBIM7P-201ENST00000418074 855 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AL121878.1-201ENST00000418638 859 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC007394.1-201ENST00000421941 531 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AL138787.1-202ENST00000437804 898 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC073052.1-201ENST00000440417 714 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC012512.1-201ENST00000446594 718 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 RPL7AP6-201ENST00000477943 801 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC004453.1-201ENST00000487895 408 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 NPM1P52-201ENST00000518264 846 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC125612.1-201ENST00000547580 377 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 MIR3691-201ENST00000578066 90 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 EIF1P5-201ENST00000585002 234 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AL021707.7-201ENST00000607991 416 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC093799.2-201ENST00000610062 578 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC015914.2-201ENST00000618167 288 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 AC026523.2-201ENST00000625039 7739 ntBASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCSER1Q9C0I3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCSER1Q9C0I3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCSER1Q9C0I3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms