Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC104837.2-201ENST00000427236 424 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 RPL7P56-201ENST00000429441 717 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AL136455.1-201ENST00000441083 1240 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 AP000547.1-201ENST00000454360 617 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC087672.1-201ENST00000479876 766 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC068587.1-201ENST00000483613 781 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 EIF3KP3-201ENST00000514461 639 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 RN7SKP99-201ENST00000517028 307 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM4Q9C037 OR11H3P-201ENST00000554547 982 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC073575.2-201ENST00000614212 627 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AP002799.1-201ENST00000623552 423 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC132068.1-201ENST00000623805 459 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC135068.5-201ENST00000624197 983 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM4Q9C037 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 LINC01963-201ENST00000562038 3148 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 AP000542.2-201ENST00000623199 6179 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRIM4Q9C037 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM4Q9C037 AC012618.3-205ENST00000637896 1496 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM4Q9C037 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM4Q9C037 RNA5SP183-201ENST00000362452 119 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM4Q9C037 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 CYCSP10-201ENST00000417973 294 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 AC004690.1-201ENST00000418216 328 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 AL133325.1-201ENST00000421090 382 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 RPL7AP49-201ENST00000429522 581 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 RBMY2QP-201ENST00000429799 1147 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 AL591438.1-201ENST00000433508 581 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 RN7SL481P-201ENST00000477764 299 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 STRADBP1-201ENST00000478954 1281 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 AC008897.1-201ENST00000494006 347 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 HPRT1P1-201ENST00000509498 657 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 AL133406.3-201ENST00000606817 541 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 AL356608.1-201ENST00000610034 820 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 AL353662.3-201ENST00000625131 237 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM4Q9C037 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM4Q9C037 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM4Q9C037 OR51C1P-202ENST00000641159 1444 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM4Q9C037 AC087190.4-201ENST00000574616 8334 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM4Q9C037 AL450345.1-202ENST00000605741 3881 ntBASIC5.2□□□□□ -1.58
TRIM4Q9C037 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 UGT2B26P-201ENST00000508672 1613 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 CDC27P2-201ENST00000425026 1922 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC097461.1-201ENST00000568928 2821 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 AL672167.2-201ENST00000377164 879 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 OR5M12P-201ENST00000423388 929 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC019185.1-201ENST00000442718 389 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 AL591363.1-201ENST00000450091 483 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 snoU13.20-201ENST00000459180 104 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 RPS3AP41-201ENST00000462701 778 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 RN7SL385P-201ENST00000468873 276 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC109462.1-201ENST00000491087 368 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC105233.1-201ENST00000498840 781 ntBASIC5.19□□□□□ -1.58
TRIM4Q9C037 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM4Q9C037 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms