Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC007342.8-201ENST00000623278 678 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AP002791.1-201ENST00000623291 381 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 OR11H2-202ENST00000641517 1085 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 LINC01808-202ENST00000641680 1116 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 MTCO1P15-201ENST00000529569 1526 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC026523.2-201ENST00000625039 7739 ntBASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM54Q9BYV2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 RNU6-636P-201ENST00000384598 107 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 MIR320B1-201ENST00000390209 79 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC004386.1-201ENST00000393214 761 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 FTH1P16-201ENST00000435241 552 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC073052.1-201ENST00000440417 714 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 HMGB3P6-201ENST00000444896 598 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 RPS23P2-201ENST00000463671 415 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 OR7E157P-201ENST00000494376 911 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AP001636.2-201ENST00000525517 696 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC009097.3-201ENST00000563557 1018 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC015660.5-201ENST00000623238 564 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC021106.3-201ENST00000623925 531 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 AC120349.3-201ENST00000624377 529 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 RLIMP2-201ENST00000427891 1563 ntBASIC5.67□□□□□ -1.5
TRIM54Q9BYV2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 CCT8P1-201ENST00000413611 1657 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 RN7SKP187-201ENST00000365536 330 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 RN7SKP29-201ENST00000410957 272 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 AL445213.1-201ENST00000412589 747 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 RPS7P9-201ENST00000414704 586 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 TCEA1P4-201ENST00000415066 844 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 LINC01881-201ENST00000416103 412 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 RPS24P7-201ENST00000416921 246 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 GTF2IP2-201ENST00000424290 697 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 RPS27AP6-201ENST00000427962 448 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 AC138761.5-201ENST00000433967 325 ntBASIC5.66□□□□□ -1.5
TRIM54Q9BYV2 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms