Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL360270.2-201ENST00000562952 5985 ntBASIC7.38□□□□□ -1.23
SCAPERQ9BY12 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 LRRC37BP1-201ENST00000398851 714 ntBASIC7.38□□□□□ -1.23
SCAPERQ9BY12 RNU6ATAC34P-201ENST00000408879 121 ntBASIC7.38□□□□□ -1.23
SCAPERQ9BY12 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 UQCRBP1-201ENST00000421129 336 ntBASIC7.38□□□□□ -1.23
SCAPERQ9BY12 AL450023.3-201ENST00000440592 271 ntBASIC7.38□□□□□ -1.23
SCAPERQ9BY12 AC016772.1-201ENST00000444170 1261 ntBASIC7.38□□□□□ -1.23
SCAPERQ9BY12 NPM1P6-201ENST00000521088 871 ntBASIC7.38□□□□□ -1.23
SCAPERQ9BY12 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 ASNSP1-204ENST00000641977 1664 ntBASIC7.38□□□□□ -1.23
SCAPERQ9BY12 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 AC104118.1-201ENST00000607625 1589 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 SCAND3P1-201ENST00000439854 1060 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 AC023271.1-201ENST00000445936 1090 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 OR2A3P-201ENST00000493774 953 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 AP000619.2-201ENST00000546014 969 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 AC007224.1-201ENST00000564410 144 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 BNIP3P22-201ENST00000593399 556 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 BNIP3P33-201ENST00000598912 569 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 AC100847.1-201ENST00000611316 481 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 AP000756.2-201ENST00000624168 2567 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 AC097063.1-201ENST00000426714 1797 ntBASIC7.37□□□□□ -1.23
SCAPERQ9BY12 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCAPERQ9BY12 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AC044797.1-201ENST00000445744 679 ntBASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 OR8G5-201ENST00000524943 1041 ntBASIC7.36□□□□□ -1.23
SCAPERQ9BY12 CYCSP29-201ENST00000533731 318 ntBASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 VN1R85P-201ENST00000601587 426 ntBASIC7.36□□□□□ -1.23
SCAPERQ9BY12 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AC108359.1-201ENST00000616451 1211 ntBASIC7.36□□□□□ -1.23
SCAPERQ9BY12 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCAPERQ9BY12 OR6C69P-201ENST00000394268 893 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 ST13P16-201ENST00000401760 781 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 RPL21P108-201ENST00000413857 481 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 RPL7AP49-201ENST00000429522 581 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 RPS27AP12-201ENST00000429552 465 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AL591438.1-201ENST00000433508 581 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC138761.5-201ENST00000433967 325 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AL691482.1-201ENST00000453255 87 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 RPL7P32-201ENST00000457119 744 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 AC091180.1-201ENST00000462104 372 ntBASIC7.35□□□□□ -1.23
SCAPERQ9BY12 RPL21P129-201ENST00000491732 478 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms