Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AKAP17BP-201ENST00000431706 2719 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 AC090643.1-201ENST00000623600 3100 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 NCOA4P2-201ENST00000340589 1813 ntBASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL25A1Q9BXS0 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 METTL21EP-201ENST00000298105 713 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 DEFB109C-201ENST00000382575 264 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 DEFB109B-201ENST00000382656 264 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 RNU6-209P-201ENST00000384118 107 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 SNORA51.9-201ENST00000384295 124 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 RNU6-1106P-201ENST00000390845 107 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 RN7SKP29-201ENST00000410957 272 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC127526.2-201ENST00000426436 775 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 PGBD4P3-201ENST00000440731 581 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AP000281.1-201ENST00000444036 316 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 CBWD4P-201ENST00000445695 655 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 MTCO3P20-201ENST00000454926 688 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 RNU6-420P-201ENST00000458780 107 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC073594.1-201ENST00000462065 364 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AP005202.1-201ENST00000489915 867 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC087808.1-201ENST00000520501 361 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 OR4A45P-201ENST00000529954 901 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC140063.1-201ENST00000541343 259 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC068305.2-201ENST00000550567 1205 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC010591.1-201ENST00000603941 649 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AL080274.1-201ENST00000605565 220 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 MIR6820-201ENST00000611508 62 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC036108.4-201ENST00000611654 2516 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AP003471.1-202ENST00000319051 1988 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 MTND5P27-201ENST00000428871 1720 ntBASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL25A1Q9BXS0 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 TMEM75-201ENST00000624314 2165 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 AC026951.1-201ENST00000559530 2459 ntBASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL25A1Q9BXS0 TTC3P1-201ENST00000399586 6081 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms