Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ABCA3Q99758 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.34□□□□□ -1.39
ABCA3Q99758 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ABCA3Q99758 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ABCA3Q99758 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.34□□□□□ -1.39
ABCA3Q99758 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
ABCA3Q99758 UGT2B26P-201ENST00000508672 1613 ntBASIC6.34□□□□□ -1.39
ABCA3Q99758 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
ABCA3Q99758 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
ABCA3Q99758 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.33□□□□□ -1.4
ABCA3Q99758 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.33□□□□□ -1.4
ABCA3Q99758 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ABCA3Q99758 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ABCA3Q99758 MIR383-201ENST00000362257 73 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 MIR208A-201ENST00000362287 71 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 SNORA48.4-201ENST00000391089 134 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 OR8G2P-201ENST00000412796 908 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 AC011933.1-201ENST00000413334 321 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 RPS17P8-201ENST00000434525 335 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.33□□□□□ -1.4
ABCA3Q99758 AC116533.1-201ENST00000459748 321 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 AC041039.1-201ENST00000485656 536 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.33□□□□□ -1.4
ABCA3Q99758 AC021193.1-201ENST00000511607 420 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 AL049794.2-201ENST00000616301 365 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 RNA5SP196-201ENST00000625967 102 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ABCA3Q99758 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.33□□□□□ -1.4
ABCA3Q99758 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.33□□□□□ -1.4
ABCA3Q99758 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.33□□□□□ -1.4
ABCA3Q99758 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.33□□□□□ -1.4
ABCA3Q99758 OR1F12-201ENST00000402365 945 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 PPIAP31-201ENST00000405422 495 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.33□□□□□ -1.4
ABCA3Q99758 COX6CP13-201ENST00000428703 226 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.33□□□□□ -1.4
ABCA3Q99758 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.33□□□□□ -1.4
ABCA3Q99758 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 AC093249.4-201ENST00000564755 259 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 RN7SL176P-201ENST00000580352 264 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 PRPF19P1-201ENST00000584766 898 ntBASIC6.33□□□□□ -1.4
ABCA3Q99758 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ABCA3Q99758 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ABCA3Q99758 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
ABCA3Q99758 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ABCA3Q99758 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ABCA3Q99758 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ABCA3Q99758 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.32□□□□□ -1.4
ABCA3Q99758 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.32□□□□□ -1.4
ABCA3Q99758 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.32□□□□□ -1.4
ABCA3Q99758 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ABCA3Q99758 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
ABCA3Q99758 AL121657.1-201ENST00000327215 531 ntBASIC6.32□□□□□ -1.4
ABCA3Q99758 RNU1-130P-201ENST00000363930 160 ntBASIC6.32□□□□□ -1.4
ABCA3Q99758 RN7SKP224-201ENST00000364140 325 ntBASIC6.32□□□□□ -1.4
ABCA3Q99758 TMSB10P2-201ENST00000416049 131 ntBASIC6.32□□□□□ -1.4
ABCA3Q99758 RPS12P10-201ENST00000427031 377 ntBASIC6.32□□□□□ -1.4
ABCA3Q99758 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.32□□□□□ -1.4
ABCA3Q99758 AC034105.4-201ENST00000568304 277 ntBASIC6.32□□□□□ -1.4
ABCA3Q99758 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.32□□□□□ -1.4
ABCA3Q99758 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ABCA3Q99758 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.32□□□□□ -1.4
ABCA3Q99758 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ABCA3Q99758 AL592182.3-201ENST00000642132 3304 ntBASIC6.32□□□□□ -1.4
ABCA3Q99758 VN2R3P-201ENST00000422626 1412 ntBASIC6.32□□□□□ -1.4
ABCA3Q99758 AC135352.1-201ENST00000506173 1418 ntBASIC6.32□□□□□ -1.4
ABCA3Q99758 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ABCA3Q99758 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ABCA3Q99758 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.32□□□□□ -1.4
ABCA3Q99758 AC034229.2-201ENST00000566945 2508 ntBASIC6.31□□□□□ -1.4
ABCA3Q99758 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
ABCA3Q99758 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ABCA3Q99758 RN7SKP280-201ENST00000364196 304 ntBASIC6.31□□□□□ -1.4
ABCA3Q99758 AC007618.1-201ENST00000366455 732 ntBASIC6.31□□□□□ -1.4
ABCA3Q99758 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.31□□□□□ -1.4
ABCA3Q99758 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.31□□□□□ -1.4
ABCA3Q99758 RRM2P4-201ENST00000441721 562 ntBASIC6.31□□□□□ -1.4
ABCA3Q99758 RN7SL98P-201ENST00000462271 300 ntBASIC6.31□□□□□ -1.4
ABCA3Q99758 RNU1-45P-201ENST00000517191 141 ntBASIC6.31□□□□□ -1.4
ABCA3Q99758 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.31□□□□□ -1.4
ABCA3Q99758 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.31□□□□□ -1.4
ABCA3Q99758 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.31□□□□□ -1.4
ABCA3Q99758 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.31□□□□□ -1.4
ABCA3Q99758 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.31□□□□□ -1.4
ABCA3Q99758 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.31□□□□□ -1.4
ABCA3Q99758 AL161912.2-201ENST00000565707 3007 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms