Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.34□□□□□ -1.55
SNX18Q96RF0 AC092106.3-201ENST00000611308 722 ntBASIC5.34□□□□□ -1.55
SNX18Q96RF0 AL445670.1-201ENST00000618889 801 ntBASIC5.34□□□□□ -1.55
SNX18Q96RF0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.34□□□□□ -1.55
SNX18Q96RF0 AP002782.1-201ENST00000623107 614 ntBASIC5.34□□□□□ -1.55
SNX18Q96RF0 SNX18P12-201ENST00000624821 759 ntBASIC5.34□□□□□ -1.55
SNX18Q96RF0 AL357562.1-201ENST00000624911 609 ntBASIC5.34□□□□□ -1.55
SNX18Q96RF0 AC017037.3-201ENST00000625016 472 ntBASIC5.34□□□□□ -1.55
SNX18Q96RF0 AC139713.2-210ENST00000641741 992 ntBASIC5.34□□□□□ -1.55
SNX18Q96RF0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNX18Q96RF0 AC104260.2-201ENST00000623551 3497 ntBASIC5.34□□□□□ -1.55
SNX18Q96RF0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX18Q96RF0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNX18Q96RF0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SNX18Q96RF0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.34□□□□□ -1.56
SNX18Q96RF0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.34□□□□□ -1.56
SNX18Q96RF0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.34□□□□□ -1.56
SNX18Q96RF0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SNX18Q96RF0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.34□□□□□ -1.56
SNX18Q96RF0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SNX18Q96RF0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SNX18Q96RF0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SNX18Q96RF0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 GNL2P1-201ENST00000451274 2190 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL161756.3-201ENST00000641216 2071 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL513185.3-201ENST00000433335 1300 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC117409.1-201ENST00000470499 1310 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 COX6B1P3-201ENST00000312310 260 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 Y_RNA.169-201ENST00000363745 96 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 RN7SKP269-201ENST00000365545 319 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 MIR142-201ENST00000384835 87 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 RN7SKP278-201ENST00000410504 342 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 GPS2P1-201ENST00000411761 986 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL590806.1-201ENST00000415818 853 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 RPS3AP37-201ENST00000419176 745 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 ZNF885P-201ENST00000420174 1098 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 NAP1L4P2-201ENST00000425958 899 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC099677.3-201ENST00000427081 395 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 USP9YP11-201ENST00000427537 717 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC096775.1-201ENST00000437724 448 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 DNAJA1P5-201ENST00000440278 943 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC073052.1-201ENST00000440417 714 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 RSL24D1P3-201ENST00000449255 495 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 GTF2IP12-201ENST00000456547 356 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL603882.1-201ENST00000463059 681 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC098583.1-201ENST00000480875 255 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC079203.1-201ENST00000487972 404 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 NDUFS5P6-201ENST00000529136 295 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 OR8I1P-201ENST00000529291 931 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL442163.2-201ENST00000553912 710 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC025165.5-201ENST00000602802 578 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL358072.1-201ENST00000604156 575 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC018618.2-201ENST00000604770 446 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC005377.1-201ENST00000605126 456 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC245008.1-201ENST00000608123 476 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC092681.3-201ENST00000609463 678 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL390318.1-201ENST00000624564 687 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 AC068620.4-201ENST00000636730 1182 ntBASIC5.33□□□□□ -1.56
SNX18Q96RF0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SNX18Q96RF0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX18Q96RF0 AL022311.1-201ENST00000623726 19416 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms