Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 PTMAP2-201ENST00000397627 327 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AL356095.1-201ENST00000417217 199 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 RN7SKP67-201ENST00000515905 235 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC020978.9-201ENST00000624380 1141 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 VN2R3P-201ENST00000422626 1412 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 GLUD1P9-201ENST00000420997 1173 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 RPL5P32-201ENST00000454085 879 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 RNU1-132P-201ENST00000364300 164 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 AL596275.2-208ENST00000641192 594 ntBASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CSMD1Q96PZ7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AL390879.1-201ENST00000439143 386 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 snoU13.29-201ENST00000459370 104 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 RN7SL132P-201ENST00000478131 296 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 PSMB7P1-201ENST00000556349 514 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AL121772.2-201ENST00000614331 297 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AL139254.3-201ENST00000641097 674 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 RLIMP1-201ENST00000339626 1680 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 SOCS5P3-201ENST00000425115 1576 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 MAX-203ENST00000341653 330 ntTSL 2 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 RN7SKP33-201ENST00000410942 340 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 TAAR4P-201ENST00000454843 1039 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 RN7SL441P-201ENST00000492388 296 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 TPT1P3-201ENST00000492841 512 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 MIR5699-201ENST00000578903 90 ntBASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CSMD1Q96PZ7 TLK1P1-201ENST00000456760 2440 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms