Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 ZNF321P-202ENST00000550843 495 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 HNRNPCP1-201ENST00000556181 766 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AGGF1P7-201ENST00000562369 913 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 RBM22P12-201ENST00000567098 1255 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC008088.1-201ENST00000580993 280 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AL138478.1-201ENST00000612252 832 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC090607.5-201ENST00000615692 224 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AP005431.1-201ENST00000618479 319 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC026124.2-201ENST00000621847 656 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 ZNF733P-202ENST00000444809 1573 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 OR13C1P-202ENST00000641378 2919 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC123769.1-201ENST00000530992 3192 ntBASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTHRC1Q96CG8 AC106872.5-201ENST00000508856 1416 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC011933.2-201ENST00000578539 2790 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 RNU4-92P-201ENST00000363783 136 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 RNU4-51P-201ENST00000364206 140 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 RNA5SP510-201ENST00000364697 99 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 MCTS2P-201ENST00000394552 546 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 MTCO1P56-201ENST00000401674 224 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AP000357.1-201ENST00000409926 1165 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 RPS7P9-201ENST00000414704 586 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC093155.2-201ENST00000420734 937 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 HMGB3P24-201ENST00000433260 622 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC092170.1-201ENST00000440211 356 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 OTX2P1-201ENST00000450956 354 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC244505.3-201ENST00000454598 187 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 OR2AF1P-201ENST00000454899 889 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC005410.1-202ENST00000460347 485 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC008565.1-201ENST00000509046 885 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 MRPS16P1-201ENST00000523462 412 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC135279.1-201ENST00000543493 504 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC137627.1-201ENST00000545761 289 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC125611.1-201ENST00000549563 229 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC079600.1-201ENST00000550326 297 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 HSPE1P2-201ENST00000554777 306 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC015802.2-201ENST00000589690 189 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC008521.2-201ENST00000591021 259 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 Z94722.1-201ENST00000604328 474 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC015660.5-201ENST00000623238 564 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 AC011815.3-201ENST00000624194 473 ntBASIC5.31□□□□□ -1.56
CTHRC1Q96CG8 OR1S1-201ENST00000624470 978 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms