Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.46□□□□□ -1.38
ERCC4Q92889 AC108865.2-201ENST00000606881 432 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.46□□□□□ -1.38
ERCC4Q92889 AC092106.3-201ENST00000611308 722 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC4Q92889 AL139407.1-201ENST00000613826 1175 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AL359513.1-201ENST00000614364 557 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.46□□□□□ -1.38
ERCC4Q92889 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.46□□□□□ -1.38
ERCC4Q92889 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.45□□□□□ -1.38
ERCC4Q92889 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.45□□□□□ -1.38
ERCC4Q92889 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
ERCC4Q92889 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
ERCC4Q92889 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
ERCC4Q92889 RNU4-68P-201ENST00000364314 141 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.45□□□□□ -1.38
ERCC4Q92889 MIR130A-201ENST00000385274 89 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC4Q92889 MRPL53P1-201ENST00000414323 319 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AL513175.2-201ENST00000422071 443 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AL034379.1-201ENST00000423216 253 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
ERCC4Q92889 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
ERCC4Q92889 RPL5P7-201ENST00000444235 813 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 MED28P3-201ENST00000444288 531 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 CYCSP42-201ENST00000450823 238 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 GEMIN2P1-201ENST00000454246 752 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.45□□□□□ -1.38
ERCC4Q92889 RPS7P6-201ENST00000485777 579 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC4Q92889 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.45□□□□□ -1.38
ERCC4Q92889 AC021193.1-201ENST00000511607 420 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 MTND4LP31-201ENST00000514859 294 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC4Q92889 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.45□□□□□ -1.38
ERCC4Q92889 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.45□□□□□ -1.38
ERCC4Q92889 OR4A43P-201ENST00000532938 908 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC4Q92889 AC006530.1-201ENST00000555980 571 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC4Q92889 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.45□□□□□ -1.38
ERCC4Q92889 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.45□□□□□ -1.38
ERCC4Q92889 RN7SL622P-201ENST00000585292 275 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AL358072.1-201ENST00000604156 575 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AC108673.3-201ENST00000609183 335 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.45□□□□□ -1.38
ERCC4Q92889 AC017037.3-201ENST00000625016 472 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.45□□□□□ -1.38
ERCC4Q92889 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.45□□□□□ -1.38
ERCC4Q92889 MIR3974-201ENST00000637126 96 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
ERCC4Q92889 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.45□□□□□ -1.38
ERCC4Q92889 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 AL513185.3-201ENST00000433335 1300 ntBASIC6.45□□□□□ -1.38
ERCC4Q92889 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC4Q92889 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
ERCC4Q92889 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
ERCC4Q92889 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
ERCC4Q92889 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
ERCC4Q92889 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 AC010132.2-201ENST00000295493 1043 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC4Q92889 RNU1-136P-201ENST00000384181 164 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 RNU6-1242P-201ENST00000391052 103 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 ATF1P1-201ENST00000406040 927 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AL445213.1-201ENST00000412589 747 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 MTND2P18-201ENST00000419962 1030 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 NAP1L4P2-201ENST00000425958 899 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC4Q92889 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC4Q92889 CDY12P-201ENST00000440679 1015 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC4Q92889 CDY13P-201ENST00000445813 1015 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AC005077.1-201ENST00000449226 375 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC4Q92889 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC4Q92889 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC4Q92889 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AC006512.2-201ENST00000543250 486 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AC087897.1-201ENST00000550134 156 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms