Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 RMST-209ENST00000639542 3269 ntTSL 5 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
TOPBP1Q92547 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AC021146.4-201ENST00000309229 279 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 AL022722.2-201ENST00000402519 180 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AC006946.1-201ENST00000429106 328 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 MRPL35P2-201ENST00000448009 511 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 AC093249.4-201ENST00000564755 259 ntBASIC7.98□□□□□ -1.13
TOPBP1Q92547 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.98□□□□□ -1.13
TOPBP1Q92547 CYP1D1P-201ENST00000416662 1433 ntBASIC7.97□□□□□ -1.13
TOPBP1Q92547 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 AC133552.1-201ENST00000569988 4007 ntBASIC7.97□□□□□ -1.13
TOPBP1Q92547 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 MIR2116-201ENST00000517221 80 ntBASIC7.97□□□□□ -1.13
TOPBP1Q92547 AC092709.1-201ENST00000521355 1045 ntBASIC7.97□□□□□ -1.13
TOPBP1Q92547 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TOPBP1Q92547 AC009643.2-201ENST00000603543 1448 ntBASIC7.97□□□□□ -1.13
TOPBP1Q92547 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
TOPBP1Q92547 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
TOPBP1Q92547 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TOPBP1Q92547 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
TOPBP1Q92547 SNORA70.6-201ENST00000383934 134 ntBASIC7.96□□□□□ -1.14
TOPBP1Q92547 RPS26P8-201ENST00000393490 348 ntBASIC7.96□□□□□ -1.14
TOPBP1Q92547 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
TOPBP1Q92547 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.96□□□□□ -1.14
TOPBP1Q92547 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
TOPBP1Q92547 RPL23AP93-201ENST00000440847 484 ntBASIC7.96□□□□□ -1.14
TOPBP1Q92547 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.96□□□□□ -1.14
TOPBP1Q92547 RN7SL542P-201ENST00000467147 294 ntBASIC7.96□□□□□ -1.14
TOPBP1Q92547 AC041039.1-201ENST00000485656 536 ntBASIC7.96□□□□□ -1.14
TOPBP1Q92547 NDUFB4P12-201ENST00000513465 390 ntBASIC7.96□□□□□ -1.14
TOPBP1Q92547 TRAV8-5-201ENST00000537369 341 ntBASIC7.96□□□□□ -1.14
TOPBP1Q92547 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
TOPBP1Q92547 AC023043.4-201ENST00000612081 449 ntBASIC7.96□□□□□ -1.14
TOPBP1Q92547 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
TOPBP1Q92547 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
TOPBP1Q92547 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
TOPBP1Q92547 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.95□□□□□ -1.14
TOPBP1Q92547 CASC19-243ENST00000641588 1546 ntBASIC7.95□□□□□ -1.14
TOPBP1Q92547 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOPBP1Q92547 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOPBP1Q92547 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC7.95□□□□□ -1.14
TOPBP1Q92547 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC7.95□□□□□ -1.14
TOPBP1Q92547 CEACAMP8-201ENST00000413902 580 ntBASIC7.95□□□□□ -1.14
TOPBP1Q92547 TMSB10P2-201ENST00000416049 131 ntBASIC7.95□□□□□ -1.14
TOPBP1Q92547 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
TOPBP1Q92547 AP001324.1-201ENST00000428553 399 ntBASIC7.95□□□□□ -1.14
TOPBP1Q92547 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC7.95□□□□□ -1.14
TOPBP1Q92547 AC021193.1-201ENST00000511607 420 ntBASIC7.95□□□□□ -1.14
TOPBP1Q92547 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.95□□□□□ -1.14
TOPBP1Q92547 AC018695.5-201ENST00000605872 315 ntBASIC7.95□□□□□ -1.14
TOPBP1Q92547 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.95□□□□□ -1.14
TOPBP1Q92547 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOPBP1Q92547 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TOPBP1Q92547 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
TOPBP1Q92547 AC017104.4-201ENST00000636283 1592 ntBASIC7.95□□□□□ -1.14
TOPBP1Q92547 AC034229.2-201ENST00000566945 2508 ntBASIC7.95□□□□□ -1.14
TOPBP1Q92547 PRNCR1-201ENST00000635449 12727 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TOPBP1Q92547 RNU1-94P-201ENST00000362627 173 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 RAB9AP4-201ENST00000415230 609 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 HSFY6P-201ENST00000445573 403 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 AC023271.1-201ENST00000445936 1090 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms