Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 KARSP1-201ENST00000451871 1752 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 AC013442.1-201ENST00000397347 228 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 VN1R31P-201ENST00000417498 730 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 AC093655.2-201ENST00000425735 631 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 AC079807.1-201ENST00000429993 481 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 RPL35AP21-201ENST00000437667 333 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 UBA52P7-201ENST00000486088 380 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 UBA52P3-201ENST00000491303 382 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 AF186190.1-201ENST00000517470 480 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 AC009704.2-201ENST00000618739 483 ntBASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLHC1Q8NHS4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLHC1Q8NHS4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CLHC1Q8NHS4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.84□□□□□ -1.64
CLHC1Q8NHS4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CLHC1Q8NHS4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 SCN1A-220ENST00000641603 12506 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 RNA5SP132-201ENST00000364725 118 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 RNU1-43P-201ENST00000365052 165 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 OR13C3-201ENST00000374781 1108 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AC098592.2-201ENST00000413158 265 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AC007738.1-201ENST00000413892 348 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 CFL1P1-202ENST00000432948 411 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AP000936.3-201ENST00000438127 255 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 TXNP5-201ENST00000441043 315 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AL157385.1-201ENST00000446973 268 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AL691482.1-201ENST00000453255 87 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 PGAM1P13-201ENST00000507497 754 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AGGF1P9-201ENST00000561884 913 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 AP002505.2-201ENST00000623585 696 ntBASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.83□□□□□ -1.64
CLHC1Q8NHS4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL731566.1-201ENST00000620490 1937 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 RN7SKP113-201ENST00000363891 295 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL353625.1-202ENST00000366273 571 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC019155.1-201ENST00000382242 574 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 SNORA70.10-201ENST00000384515 134 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 NANOGP4-201ENST00000427230 913 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms