Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 SNORA73.1-201ENST00000363107 205 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 RN7SKP273-201ENST00000411392 314 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 RPL34P20-201ENST00000442771 351 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 OR2AF1P-201ENST00000454899 889 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AC090114.3-201ENST00000479267 829 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AC006499.3-201ENST00000506077 748 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 IGLV2-28-201ENST00000520681 304 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AC006116.3-201ENST00000592968 361 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AC009163.6-201ENST00000612367 342 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 LINC01739-205ENST00000641890 573 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AP000542.2-201ENST00000623199 6179 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AC068446.1-201ENST00000556425 1549 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 CIR1P2-201ENST00000514821 1342 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 RNA5SP455-201ENST00000365190 119 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 Z97832.1-201ENST00000402490 328 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AL356981.1-201ENST00000454879 684 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AC005532.2-201ENST00000467154 373 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 RNA5SP43-201ENST00000516559 110 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 RPL23AP53-201ENST00000521854 457 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 RN7SL753P-201ENST00000581238 290 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 EIF1P5-201ENST00000585002 234 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AC124856.1-201ENST00000600819 896 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 AL512624.1-201ENST00000613638 469 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 SAMMSON-227ENST00000642114 1199 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 ECM1P2-201ENST00000503354 1577 ntBASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC65Q8IXS2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 ZNF652P1-201ENST00000442420 1309 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 U8.4-201ENST00000363626 134 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AL136116.2-201ENST00000404020 785 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 QRSL1P2-201ENST00000418582 964 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AC092447.2-201ENST00000435487 669 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 EEF1B2P5-201ENST00000444820 548 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AL163193.1-201ENST00000444895 788 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 RPS17P2-201ENST00000461663 408 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 RN7SL799P-201ENST00000475891 298 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 BX284632.1-201ENST00000478218 541 ntBASIC5.53□□□□□ -1.52
CCDC65Q8IXS2 RN7SL629P-201ENST00000489622 285 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms