Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AL359922.3-201ENST00000624779 1670 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 RN7SKP174-201ENST00000363803 330 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 SNORA62.2-201ENST00000364672 152 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 SNORA7A-201ENST00000384765 139 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 RPS3AP36-201ENST00000398190 775 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 SNORA3.1-201ENST00000408166 111 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 RNA5SP115-201ENST00000411160 107 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 RPS3AP3-201ENST00000411933 242 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 FCF1P2-201ENST00000415284 583 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 TMBIM7P-201ENST00000418074 855 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 USP9YP27-201ENST00000418455 438 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC128677.1-201ENST00000436016 442 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 LDHAP2-201ENST00000437325 985 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC007383.1-201ENST00000445875 636 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 MGAT2P1-201ENST00000449718 797 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 RPS3AP14-201ENST00000483907 780 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 HMGB1P29-201ENST00000505659 499 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 OR5M14P-201ENST00000506803 618 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC010327.2-201ENST00000587647 488 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 RPL7AP69-201ENST00000595306 806 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 MLECP1-201ENST00000615893 709 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AL445264.1-201ENST00000621719 171 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC073862.4-201ENST00000622982 854 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC068880.5-201ENST00000624331 290 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AL359922.2-201ENST00000581788 3017 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 FANCD2P2-201ENST00000437591 1400 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RNF135Q8IUD6 SPATA31C1-201ENST00000420021 3895 ntBASIC7.49□□□□□ -1.21
RNF135Q8IUD6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AC068870.3-201ENST00000625077 2536 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AL354854.1-201ENST00000455940 1363 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AC245100.2-201ENST00000454544 1679 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 RNA5SP382-201ENST00000363355 112 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 RNU6-1122P-201ENST00000384449 107 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 FAT1P1-201ENST00000406588 507 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 MIR1302-11-201ENST00000408051 138 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 MIR1302-9-201ENST00000408365 138 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 MIR1302-10-201ENST00000408734 138 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 BOLA3P4-201ENST00000418151 400 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AC083875.1-201ENST00000419509 405 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AL953862.1-201ENST00000423016 168 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 GAPDHP51-201ENST00000426454 1000 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF135Q8IUD6 AC046144.1-201ENST00000478559 1853 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 RN7SL37P-201ENST00000490461 307 ntBASIC7.48□□□□□ -1.21
RNF135Q8IUD6 RPL15P21-201ENST00000495592 567 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms