Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DHX9P1-201ENST00000436565 3076 ntBASIC4.47□□□□□ -1.69
LRRC28Q86X40 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
LRRC28Q86X40 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LRRC28Q86X40 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRC28Q86X40 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRRC28Q86X40 DDX18P4-201ENST00000511690 1966 ntBASIC4.47□□□□□ -1.69
LRRC28Q86X40 MAPK10-286ENST00000641208 8747 ntBASIC4.47□□□□□ -1.69
LRRC28Q86X40 AC011503.2-201ENST00000594230 1500 ntBASIC4.46□□□□□ -1.69
LRRC28Q86X40 AC063923.1-201ENST00000478982 1619 ntBASIC4.46□□□□□ -1.69
LRRC28Q86X40 AC011493.1-201ENST00000596753 1632 ntBASIC4.46□□□□□ -1.69
LRRC28Q86X40 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LRRC28Q86X40 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 OR4G1P-202ENST00000641173 1788 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC28Q86X40 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC28Q86X40 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 OR8V1P-201ENST00000395193 873 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 CKS1BP6-201ENST00000424932 240 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 MRPL48P1-201ENST00000445390 636 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 RN7SL727P-201ENST00000482164 296 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 AC015864.1-201ENST00000496512 544 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 RNA5SP373-201ENST00000517271 95 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 AC005868.1-201ENST00000536421 331 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 AP002373.2-201ENST00000541631 1060 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 RN7SL52P-201ENST00000584271 284 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 AC090527.3-201ENST00000619041 548 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 CYP4F35P-202ENST00000636121 390 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 AL596275.2-204ENST00000641628 552 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 AL596275.2-206ENST00000641957 626 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC28Q86X40 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC28Q86X40 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC28Q86X40 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC28Q86X40 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRC28Q86X40 CASC19-206ENST00000641028 1430 ntBASIC4.46□□□□□ -1.7
LRRC28Q86X40 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRRC28Q86X40 C4BPAP1-201ENST00000415474 1893 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LRRC28Q86X40 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRC28Q86X40 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRC28Q86X40 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRC28Q86X40 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRC28Q86X40 RNU1-43P-201ENST00000365052 165 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRC28Q86X40 MIR105-1-201ENST00000385222 81 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 SPTLC1P2-201ENST00000407089 121 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 RN7SKP278-201ENST00000410504 342 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 TRGV5P-201ENST00000419915 354 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 AC005033.1-201ENST00000428904 813 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 TMX2P1-201ENST00000436507 708 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 FAR2P1-206ENST00000449736 709 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 RHEBP2-201ENST00000450289 600 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 RN7SL441P-201ENST00000492388 296 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 SNRPCP2-201ENST00000504370 475 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 AC022832.1-201ENST00000530718 645 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 AC016180.1-201ENST00000567945 403 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 AL121612.2-201ENST00000612261 482 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 AC016769.4-201ENST00000616893 535 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 AP002505.2-201ENST00000623585 696 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LRRC28Q86X40 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 UGT2B26P-201ENST00000508672 1613 ntBASIC4.45□□□□□ -1.7
LRRC28Q86X40 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRC28Q86X40 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms