Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 MIR4286-201ENST00000580651 93 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 AC233968.1-201ENST00000611212 1300 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 AC025574.1-201ENST00000554784 1653 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 OFD1P9Y-201ENST00000417699 1491 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 RPS26P8-201ENST00000393490 348 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 VN1R34P-201ENST00000447387 883 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 AC105137.1-201ENST00000484355 562 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 OR2BH1P-201ENST00000608850 864 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 OR14L1P-202ENST00000641545 3009 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 SPRR2C-201ENST00000290702 219 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 GOT2P5-201ENST00000433995 546 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 RN7SKP67-201ENST00000515905 235 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 OR8Q1P-201ENST00000526467 655 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 AGGF1P6-201ENST00000569213 976 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 AL354984.3-201ENST00000604803 325 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 FAM91A3P-201ENST00000456826 2544 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 AL451142.1-201ENST00000375867 775 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 RN7SKP202-201ENST00000410439 330 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 YY1P1-201ENST00000427625 668 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 AP000827.1-201ENST00000527814 258 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 RN7SKP153-201ENST00000365026 316 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 AL583835.1-201ENST00000399570 407 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 RNU1-6P-201ENST00000516290 144 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC022884.2-201ENST00000578535 580 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC023043.4-201ENST00000612081 449 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC112484.5-201ENST00000624189 228 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC006453.5-201ENST00000636451 619 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS13CQ709C8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 SNORA70.9-201ENST00000384370 135 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC114814.2-201ENST00000419195 485 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 UQCRBP1-201ENST00000421129 336 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS13CQ709C8 AC106782.4-201ENST00000568264 210 ntBASIC3.8□□□□□ -1.8
VPS13CQ709C8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms