Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AC008629.2-201ENST00000503783 483 ntBASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AC138409.2-202ENST00000507274 458 ntBASIC8.31□□□□□ -1.08
CDCA8Q53HL2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 MTATP6P1-201ENST00000514057 681 ntBASIC8.31□□□□□ -1.08
CDCA8Q53HL2 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AC100767.2-201ENST00000604840 693 ntBASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AC096553.1-201ENST00000605169 829 ntBASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AC103591.3-201ENST00000608684 209 ntBASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AC019131.2-201ENST00000609071 870 ntBASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AP000254.1-201ENST00000609934 520 ntBASIC8.31□□□□□ -1.08
CDCA8Q53HL2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDCA8Q53HL2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 METTL21EP-201ENST00000298105 713 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 RNA5SP211-201ENST00000365516 117 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 CGA-201ENST00000369582 729 ntTSL 5 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AL034403.1-201ENST00000399414 885 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 RPS27AP11-201ENST00000402798 447 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 MIR1203-201ENST00000408812 85 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AF274854.1-201ENST00000413236 615 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 FO393419.3-201ENST00000428741 282 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AL731534.1-201ENST00000434711 269 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 NDUFS5P5-201ENST00000437256 321 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AL162739.1-201ENST00000450606 307 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 TPMTP4-201ENST00000450749 678 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 SDC4P-201ENST00000453285 601 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC124945.1-201ENST00000485133 188 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC069304.1-201ENST00000491593 704 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC008945.1-201ENST00000505144 499 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 OR5AK3P-201ENST00000527486 1297 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AP000619.3-201ENST00000535634 1127 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 RERGL-202ENST00000536890 367 ntTSL 3 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AGGF1P7-201ENST00000562369 913 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 ATP5F1P7-201ENST00000567330 760 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 ISCA1P3-201ENST00000577104 373 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 MIR3915-201ENST00000578518 97 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 NTAN1P1-201ENST00000603150 646 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 ZNF663P-202ENST00000641770 1131 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 OLMALINC-203ENST00000641087 3779 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 AL355377.1-201ENST00000621125 1653 ntBASIC8.3□□□□□ -1.08
CDCA8Q53HL2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CDCA8Q53HL2 ANKRD20A17P-201ENST00000511745 1330 ntBASIC8.29□□□□□ -1.08
CDCA8Q53HL2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDCA8Q53HL2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDCA8Q53HL2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
CDCA8Q53HL2 AC092724.1-201ENST00000624623 3397 ntBASIC8.29□□□□□ -1.08
CDCA8Q53HL2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDCA8Q53HL2 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDCA8Q53HL2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CDCA8Q53HL2 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDCA8Q53HL2 RNU1-150P-201ENST00000362491 162 ntBASIC8.29□□□□□ -1.08
CDCA8Q53HL2 snoZ40.1-201ENST00000364540 72 ntBASIC8.29□□□□□ -1.08
CDCA8Q53HL2 Y_RNA.559-201ENST00000384686 107 ntBASIC8.29□□□□□ -1.08
CDCA8Q53HL2 AL360271.1-201ENST00000395679 510 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms