Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RFX4Q33E94 AL390774.1-201ENST00000411924 246 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 CEACAMP8-201ENST00000413902 580 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 VN1R3-201ENST00000418822 919 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AC104843.2-201ENST00000427666 297 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AC002069.1-201ENST00000429649 1159 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.64□□□□□ -1.67
RFX4Q33E94 FAM96AP1-201ENST00000430879 482 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 RPS27P18-201ENST00000431701 247 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AC092162.1-201ENST00000432828 434 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX4Q33E94 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.64□□□□□ -1.67
RFX4Q33E94 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX4Q33E94 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.64□□□□□ -1.67
RFX4Q33E94 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.64□□□□□ -1.67
RFX4Q33E94 RN7SL443P-201ENST00000464331 290 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AC098583.1-201ENST00000480875 255 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 RPL7P6-201ENST00000480903 738 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 RPL7AP10-201ENST00000481016 791 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.64□□□□□ -1.67
RFX4Q33E94 RPS4XP20-201ENST00000505751 772 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AC090568.1-201ENST00000509499 856 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 RNU6-941P-201ENST00000516346 108 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.64□□□□□ -1.67
RFX4Q33E94 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX4Q33E94 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX4Q33E94 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX4Q33E94 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.64□□□□□ -1.67
RFX4Q33E94 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.64□□□□□ -1.67
RFX4Q33E94 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFX4Q33E94 SUGT1P3-202ENST00000604259 383 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AC104695.2-201ENST00000605056 775 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 AC126175.1-201ENST00000617041 758 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX4Q33E94 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RFX4Q33E94 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFX4Q33E94 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RFX4Q33E94 AC005332.5-201ENST00000591222 2919 ntBASIC4.64□□□□□ -1.67
RFX4Q33E94 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.64□□□□□ -1.67
RFX4Q33E94 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.64□□□□□ -1.67
RFX4Q33E94 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.63□□□□□ -1.67
RFX4Q33E94 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFX4Q33E94 MIPEPP2-201ENST00000422560 1819 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AL672167.1-205ENST00000641112 3080 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 AC112255.1-201ENST00000624070 2493 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFX4Q33E94 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RFX4Q33E94 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RFX4Q33E94 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFX4Q33E94 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RFX4Q33E94 RNU1-77P-201ENST00000390868 162 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX4Q33E94 VDAC2P1-201ENST00000399358 958 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 NUDT19P3-201ENST00000404698 555 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.63□□□□□ -1.67
RFX4Q33E94 CDY17P-201ENST00000414121 1282 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.63□□□□□ -1.67
RFX4Q33E94 QRSL1P2-201ENST00000418582 964 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AC093655.2-201ENST00000425735 631 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 RPS4XP16-201ENST00000427198 791 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.63□□□□□ -1.67
RFX4Q33E94 TMX2P1-201ENST00000436507 708 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX4Q33E94 CYCSP12-201ENST00000437729 300 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AC021146.3-201ENST00000511911 260 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 MTATP6P1-201ENST00000514057 681 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX4Q33E94 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AC126177.5-201ENST00000549599 178 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX4Q33E94 RPL21P7-201ENST00000557463 483 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 MIR3614-201ENST00000581261 86 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AC087783.2-201ENST00000605070 562 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AC022960.2-201ENST00000616300 666 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 AC140113.4-201ENST00000622087 222 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.63□□□□□ -1.67
RFX4Q33E94 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.63□□□□□ -1.67
RFX4Q33E94 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RFX4Q33E94 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.63□□□□□ -1.67
RFX4Q33E94 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.63□□□□□ -1.67
RFX4Q33E94 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFX4Q33E94 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.63□□□□□ -1.67
RFX4Q33E94 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.63□□□□□ -1.67
RFX4Q33E94 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.63□□□□□ -1.67
RFX4Q33E94 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
RFX4Q33E94 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.62□□□□□ -1.67
RFX4Q33E94 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RFX4Q33E94 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms