Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 RHOT1P3-201ENST00000436571 331 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 MYO5BP2-201ENST00000449815 1277 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC008953.1-201ENST00000497334 318 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC093763.2-201ENST00000505334 1223 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 RNA5SP43-201ENST00000516559 110 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC026688.1-201ENST00000520639 1168 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 EIF4EP5-201ENST00000528228 640 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 NMNAT1P1-201ENST00000554095 876 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC006272.2-201ENST00000594725 163 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AC005377.1-201ENST00000605126 456 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 AL121612.2-201ENST00000612261 482 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AL627230.1-201ENST00000613077 211 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AL139407.1-201ENST00000613826 1175 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AL591926.8-201ENST00000616876 211 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AL122125.1-201ENST00000616999 600 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS1Q01581 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS1Q01581 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS1Q01581 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS1Q01581 MTCO1P15-201ENST00000529569 1526 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS1Q01581 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 RNA5SP455-201ENST00000365190 119 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 AL078599.1-201ENST00000402075 293 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 RNU2-22P-201ENST00000411266 212 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 TMBIM7P-201ENST00000418074 855 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 AL034379.1-201ENST00000423216 253 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 AL627308.1-201ENST00000435693 821 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 OR7E125P-201ENST00000443450 846 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 AC008638.1-201ENST00000506035 866 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 COX6B1P5-201ENST00000509843 249 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 EIF4A2P5-201ENST00000529914 499 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 AC010547.7-201ENST00000570323 333 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 RN7SL435P-201ENST00000584418 282 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 TAS2R6P-201ENST00000605022 826 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS1Q01581 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 SALL4P2-201ENST00000423288 2910 ntBASIC4.74□□□□□ -1.65
HMGCS1Q01581 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS1Q01581 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMGCS1Q01581 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGCS1Q01581 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGCS1Q01581 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
HMGCS1Q01581 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGCS1Q01581 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMGCS1Q01581 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
HMGCS1Q01581 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMGCS1Q01581 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMGCS1Q01581 U8.4-201ENST00000363626 134 ntBASIC4.73□□□□□ -1.65
HMGCS1Q01581 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HMGCS1Q01581 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms